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SMTL ID : 6d6t.1

Human GABA-A receptor alpha1-beta2-gamma2 subtype in complex with GABA and flumazenil, conformation B

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY 3.86 Å
Oligo State
hetero-2-2-1-2-2-mer
Ligands
2 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
1 x NAG- NAG- BMA- MAN- MAN- MAN- MAN- MAN: alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
1 x NAG- NAG- BMA- MAN- MAN: alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
3 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
2 x ABU: GAMMA-AMINO-BUTANOIC ACID(Non-covalent)
12 x Y01: CHOLESTEROL HEMISUCCINATE(Non-covalent)
1 x FYP: ethyl 8-fluoro-5-methyl-6-oxo-5,6-dihydro-4H-imidazo[1,5-a][1,4]benzodiazepine-3-carboxylate(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Zhu, S. et al., Structure of a human synaptic GABAAreceptor. Nature (2018)
Release Date
2018-06-27
Peptides
Gamma-aminobutyric acid receptor subunit beta-2,Gamma-aminobutyric acid receptor subunit beta-2: AC
Gamma-aminobutyric acid receptor subunit alpha-1,Gamma-aminobutyric acid receptor subunit alpha-1: BD
Human GABA-A receptor subunit gamma-2: E
Kappa Fab Light Chain: FH
IgG2b Fab Heavy Chain: GI
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
C
C
B
B
D
D
E
E
F
I
H
L
G
J
I
K
Membrane
We predict this structure to be a membrane protein.

Gamma-aminobutyric acid receptor subunit beta-2,Gamma-aminobutyric acid receptor subunit beta-2

Toggle Identical (AC)

Gamma-aminobutyric acid receptor subunit alpha-1,Gamma-aminobutyric acid receptor subunit alpha-1

Human GABA-A receptor subunit gamma-2

Kappa Fab Light Chain

Toggle Identical (FH)

IgG2b Fab Heavy Chain

Related Entries With Identical Sequence

6d6u.1 | 6x3s.1 | 6x3t.1 | 6x3u.1 | 6x3v.1 | 6x3w.1 | 6x3x.1 | 6x3z.1 | 6x40.1 | 8dd2.1 | 8dd3.1 | 8sgo.1 | 8si9.1 | 8sid.1