SMTL ID : 6d8i.1

Mycobacterium tuberculosis polyketide synthase 13 N-terminal acyl carrier protein domain

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

monomer

Ligands

3 x CA: CALCIUM ION(Non-covalent)

CA.1: 2 residues within 4Å: Chain A: D.61 Ligands: EDO.6 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:D.61, H2O.1, H2O.1, H2O.2, H2O.3 CA.2: 2 residues within 4Å: Chain A: D.37, S.39 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.37, A:D.37, A:S.39, H2O.2, H2O.3 CA.3: 2 residues within 4Å: Chain A: A.28 Ligands: EDO.5 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:A.28, H2O.2, H2O.2, H2O.3, H2O.3

1 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)

PGE.4: 8 residues within 4Å: Chain A: M.42, V.43, L.47, S.48, S.49, A.52, A.72, F.73 No protein-ligand interaction detected (PLIP)

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.5: 7 residues within 4Å: Chain A: A.28, V.29, G.46, L.47, S.48, D.51 Ligands: CA.3 3 PLIP interactions: 3 interactions with chain A Water bridges: A:A.28, A:S.48, A:S.48 EDO.6: 2 residues within 4Å: Chain A: D.61 Ligands: CA.1 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.61 Water bridges: A:D.61 EDO.7: 4 residues within 4Å: Chain A: P.15, R.18, Q.19, R.22 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.19, A:R.22, A:R.22

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tang, S. et al., Mycobacterium tuberculosis polyketide synthase 13 N-terminal acyl carrier protein domain. To be Published

Release Date

2018-06-06

Peptides

Polyketide synthase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Polyketide synthase

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