SMTL ID : 6dfk.2 (1 other biounit)

Crystal structure of the 11S subunit of the Plasmodium falciparum proteasome, PA28

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.10 Å

Oligo State

homo-heptamer

Ligands

30 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: K.212, K.216 Ligands: SO4.2 Ligand excluded by PLIP SO4.2: 7 residues within 4Å: Chain A: K.216, K.219, Y.220 Chain B: T.215, K.219 Ligands: SO4.1, SO4.7 Ligand excluded by PLIP SO4.3: 2 residues within 4Å: Chain A: S.195, N.198 Ligand excluded by PLIP SO4.4: 5 residues within 4Å: Chain A: E.58, P.59 Chain B: R.41, K.44, R.45 Ligand excluded by PLIP SO4.5: 2 residues within 4Å: Chain B: K.212, K.216 Ligand excluded by PLIP SO4.6: 3 residues within 4Å: Chain B: K.216, K.219, Y.220 Ligand excluded by PLIP SO4.7: 4 residues within 4Å: Chain A: K.219 Chain B: Y.129, K.219 Ligands: SO4.2 Ligand excluded by PLIP SO4.8: 2 residues within 4Å: Chain B: S.195, N.198 Ligand excluded by PLIP SO4.9: 4 residues within 4Å: Chain B: P.59 Chain C: R.41, K.44, R.45 Ligand excluded by PLIP SO4.10: 3 residues within 4Å: Chain C: K.216 Chain D: K.212 Ligands: SO4.13 Ligand excluded by PLIP SO4.11: 3 residues within 4Å: Chain C: K.216, K.219, Y.220 Ligand excluded by PLIP SO4.12: 2 residues within 4Å: Chain C: S.195, N.198 Ligand excluded by PLIP SO4.13: 2 residues within 4Å: Chain C: K.212 Ligands: SO4.10 Ligand excluded by PLIP SO4.14: 5 residues within 4Å: Chain C: E.58, P.59 Chain D: R.41, K.44, R.45 Ligand excluded by PLIP SO4.15: 2 residues within 4Å: Chain D: K.212, K.216 Ligand excluded by PLIP SO4.16: 4 residues within 4Å: Chain D: K.216, K.219, Y.220 Chain E: K.219 Ligand excluded by PLIP SO4.17: 2 residues within 4Å: Chain D: S.195, N.198 Ligand excluded by PLIP SO4.18: 4 residues within 4Å: Chain D: P.59 Chain E: R.41, K.44, R.45 Ligand excluded by PLIP SO4.19: 1 residues within 4Å: Chain E: K.216 Ligand excluded by PLIP SO4.20: 2 residues within 4Å: Chain E: K.216, Y.220 Ligand excluded by PLIP SO4.21: 2 residues within 4Å: Chain E: S.195, N.198 Ligand excluded by PLIP SO4.22: 4 residues within 4Å: Chain E: P.59 Chain F: R.41, K.44, R.45 Ligand excluded by PLIP SO4.23: 2 residues within 4Å: Chain F: K.216 Ligands: SO4.28 Ligand excluded by PLIP SO4.24: 6 residues within 4Å: Chain F: K.216, K.219, Y.220 Chain G: T.215, K.219 Ligands: SO4.25 Ligand excluded by PLIP SO4.25: 4 residues within 4Å: Chain F: K.219 Chain G: Y.129, K.219 Ligands: SO4.24 Ligand excluded by PLIP SO4.26: 2 residues within 4Å: Chain F: S.195, N.198 Ligand excluded by PLIP SO4.27: 5 residues within 4Å: Chain F: E.58, P.59 Chain G: R.41, K.44, R.45 Ligand excluded by PLIP SO4.28: 4 residues within 4Å: Chain A: K.212 Chain G: K.212, K.216 Ligands: SO4.23 Ligand excluded by PLIP SO4.29: 3 residues within 4Å: Chain G: K.216, K.219, Y.220 Ligand excluded by PLIP SO4.30: 2 residues within 4Å: Chain G: S.195, N.198 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xie, S.C. et al., The structure of the PA28-20S proteasome complex from Plasmodium falciparum and implications for proteostasis. Nat Microbiol (2019)

Release Date

2019-08-07

Peptides

Subunit of proteaseome activator complex,putative: ABCDEFG

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
H

B
I

C
J

D
K

E
L

F
M

G
N

Subunit of proteaseome activator complex,putative

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