SMTL ID : 6dkw.2 (1 other biounit)

Crystal structure of Trk-A in complex with the Pan-Trk Kinase Inhibitor, compound 3.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.91 Å

Oligo State

monomer

Ligands

1 x GXA: 5-(1-methyl-1H-imidazol-4-yl)-2-[(1-{[4-(trifluoromethoxy)phenyl]acetyl}piperidin-4-yl)oxy]benzamide(Non-covalent)

GXA.1: 24 residues within 4Å: Chain A: L.28, G.29, V.36, A.54, K.56, L.76, L.79, I.84, V.85, F.101, E.102, Y.103, M.104, R.105, H.106, G.107, L.153, F.158, H.160, L.169, I.178, G.179, D.180, F.181 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:L.28, A:V.36, A:L.76, A:V.85, A:F.101, A:F.101, A:L.169, A:L.169 Hydrogen bonds: A:E.102, A:M.104, A:D.180 Halogen bonds: A:I.178

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bagal, S.K. et al., Discovery of Potent, Selective, and Peripherally Restricted Pan-Trk Kinase Inhibitors for the Treatment of Pain. J. Med. Chem. (2018)

Release Date

2018-07-11

Peptides

Tyrosine-protein kinase receptor: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Tyrosine-protein kinase receptor

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