SMTL ID : 6dlk.1

Crystal structure of DNA polymerase III subunit beta from Rickettsia rickettsii

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 8 residues within 4Å: Chain A: D.59, L.60, Y.61, D.128, K.233, L.245, S.246, K.247 4 PLIP interactions: 4 interactions with chain A Water bridges: A:T.56, A:L.60, A:K.233, A:K.233 EDO.2: 6 residues within 4Å: Chain B: S.264, S.265, S.266, K.267, N.331, Y.360 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:N.331, B:N.331 EDO.3: 1 residues within 4Å: Chain B: W.189 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:W.189 EDO.4: 3 residues within 4Å: Chain B: R.160, G.182, P.254 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:R.160, B:R.160

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Conrady, D.G. et al., Crystal structure of DNA polymerase III subunit beta from Rickettsia rickettsii. to be published

Release Date

2018-10-03

Peptides

Beta sliding clamp: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Beta sliding clamp