SMTL ID : 6dmo.1

Cryo-EM structure of human Ptch1 with three mutations L282Q/T500F/P504L

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

monomer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 3 residues within 4Å: Chain A: N.1021, Y.1022, L.1025 No protein-ligand interaction detected (PLIP)

5 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 3 residues within 4Å: Chain A: A.327, K.332, N.333 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:A.327 NAG.3: 2 residues within 4Å: Chain A: N.370, V.376 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.370 NAG.4: 1 residues within 4Å: Chain A: N.435 No protein-ligand interaction detected (PLIP) NAG.5: 2 residues within 4Å: Chain A: K.895, N.896 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:K.895 NAG.6: 2 residues within 4Å: Chain A: N.162, R.165 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:R.165

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gong, X. et al., Structural basis for the recognition of Sonic Hedgehog by human Patched1. Science (2018)

Release Date

2018-07-11

Peptides

Protein patched homolog 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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Protein patched homolog 1