SMTL ID : 6dsp.2 (1 other biounit)

LsrB from Clostridium saccharobutylicum in complex with AI-2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.37 Å

Oligo State

monomer

Ligands

1 x PAV: (2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran(Non-covalent)

PAV.1: 14 residues within 4Å: Chain A: K.29, F.35, F.36, D.110, Q.124, D.167, Q.168, W.171, N.223, D.224, S.225, F.250, L.270, W.271 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:F.35, A:L.270 Hydrogen bonds: A:K.29, A:Q.124, A:Q.168, A:D.224, A:S.225 Water bridges: A:Q.198

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Torcato, I.M. et al., Identification of novel autoinducer-2 receptors inClostridiareveals plasticity in the binding site of the LsrB receptor family. J.Biol.Chem. (2019)

Release Date

2019-02-06

Peptides

Autoinducer 2-binding protein LsrB: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Autoinducer 2-binding protein LsrB

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