SMTL ID : 6dv1.1

Crystal structure of the alpha-E-catenin actin-binding domain

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

homo-dimer

Ligands

5 x BR: BROMIDE ION(Non-covalent)

BR.1: 3 residues within 4Å: Chain A: S.9, S.25, R.27 Ligand excluded by PLIP BR.2: 3 residues within 4Å: Chain A: Q.49, M.81, T.84 Ligand excluded by PLIP BR.3: 3 residues within 4Å: Chain A: G.162 Chain B: P.34, Q.35 Ligand excluded by PLIP BR.5: 3 residues within 4Å: Chain B: E.36, Q.37, K.40 Ligand excluded by PLIP BR.6: 2 residues within 4Å: Chain B: T.119, H.123 Ligand excluded by PLIP

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.4: 3 residues within 4Å: Chain A: Y.136, R.139, Q.188 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.188 Salt bridges: A:R.139 SO4.7: 4 residues within 4Å: Chain B: S.25, R.27, A.28, K.94 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:S.25, B:S.25 Salt bridges: B:R.27, B:K.94

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ishiyama, N. et al., Force-dependent allostery of the alpha-catenin actin-binding domain controls adherens junction dynamics and functions. Nat Commun (2018)

Release Date

2018-12-19

Peptides

Catenin alpha-1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
A

Catenin alpha-1