SMTL ID : 6dwa.1 (1 other biounit)

Structure of the 4497 Antibody Fab fragment bound to a Staphylococcus aureus wall techoic acid analog

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.92 Å

Oligo State

hetero-1-1-mer

Ligands

1 x HD4: 4-O-[2-acetamido-2-deoxy-beta-D-glucopyranosyl]-1-O-phosphono-D-ribitol(Non-covalent)

HD4.1: 8 residues within 4Å: Chain A: R.53, Y.116 Chain B: S.50, F.51, W.52, N.72, G.118, D.119 9 PLIP interactions: 4 interactions with chain B, 5 interactions with chain A Hydrophobic interactions: B:W.52, A:Y.116 Hydrogen bonds: B:S.50, B:W.52, B:N.72, A:R.53, A:R.53, A:Y.116 Salt bridges: A:R.53

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fong, R. et al., Structural investigation of human S. aureus-targeting antibodies that bind wall teichoic acid. MAbs (2018)

Release Date

2018-08-29

Peptides

4497 Fab Light Chain: A
4497 Fab Heavy Chain: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

4497 Fab Light Chain

4497 Fab Heavy Chain

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