SMTL ID : 6dxw.1 (3 other biounits)

Human N-acylethanolamine-hydrolyzing acid amidase (NAAA) precursor (C126A)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 5 residues within 4Å: Chain A: N.19, Q.142, L.144, G.147, I.149 No protein-ligand interaction detected (PLIP)

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 5 residues within 4Å: Chain A: F.264, T.284, I.287, K.288, N.291 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:I.287, A:K.288 Hydrogen bonds: A:N.291

5 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 5 residues within 4Å: Chain A: E.267, T.268, N.269, Y.270, R.283 Ligand excluded by PLIP CL.4: 5 residues within 4Å: Chain A: L.22, P.76, F.151, R.203, S.207 Ligand excluded by PLIP CL.5: 4 residues within 4Å: Chain A: Y.121, S.299, L.300, K.330 Ligand excluded by PLIP CL.6: 4 residues within 4Å: Chain A: Q.114, P.237, R.238, P.258 Ligand excluded by PLIP CL.7: 5 residues within 4Å: Chain A: I.196, L.201, A.204, K.218, T.222 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gorelik, A. et al., Molecular mechanism of activation of the immunoregulatory amidase NAAA. Proc. Natl. Acad. Sci. U.S.A. (2018)

Release Date

2018-09-26

Peptides

N-acylethanolamine-hydrolyzing acid amidase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

N-acylethanolamine-hydrolyzing acid amidase

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