SMTL ID : 6e43.4 (3 other biounits)

Crystal structure of human indoleamine 2,3-dioxygenase 1 (IDO1) in complex with a BMS-978587 analog

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.71 Å

Oligo State

monomer

Ligands

1 x HQM: (1R,2S)-2-(4-[cyclohexyl(2-methylpropyl)amino]-3-{[(4-methylphenyl)carbamoyl]amino}phenyl)cyclopropane-1-carboxylic acid(Non-covalent)

HQM.1: 21 residues within 4Å: Chain A: V.127, Y.128, C.131, V.132, F.165, V.168, S.169, E.173, F.216, L.236, G.264, S.265, A.266, Q.268, S.269, H.348, I.351, V.352, I.356, L.386 Ligands: BEZ.2 21 PLIP interactions: 21 interactions with chain A Hydrophobic interactions: A:Y.128, A:V.132, A:F.165, A:F.165, A:F.216, A:F.216, A:L.236, A:I.351, A:I.351, A:V.352, A:I.356, A:L.386 Hydrogen bonds: A:S.169, A:S.169, A:S.169, A:A.266 Water bridges: A:G.264, A:G.267, A:G.267 Salt bridges: A:H.348 pi-Stacking: A:Y.128

1 x BEZ: BENZOIC ACID(Non-covalent)

BEZ.2: 8 residues within 4Å: Chain A: F.216, V.271, F.272, L.341, L.344, R.345, H.348 Ligands: HQM.1 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:F.216, A:V.271, A:F.272, A:L.341, A:L.344 Salt bridges: A:R.345, A:H.348

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Luo, S. et al., High-resolution structures of inhibitor complexes of human indoleamine 2,3-dioxygenase 1 in a new crystal form. Acta Crystallogr F Struct Biol Commun (2018)

Release Date

2018-11-14

Peptides

Indoleamine 2,3-dioxygenase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

Indoleamine 2,3-dioxygenase 1

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