SMTL ID : 6e4y.1

Anti-PCSK9 fab 6E2 bound to the N-terminal peptide from PCSK9, unmodified

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.24 Å

Oligo State

hetero-1-1-1-mer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 2 residues within 4Å: Chain A: D.56 Chain C: E.17 3 PLIP interactions: 1 interactions with chain A, 2 interactions with chain C Metal complexes: A:D.56, C:E.17, C:E.17 ZN.3: 4 residues within 4Å: Chain A: H.167 Chain B: N.142, N.143, S.179 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:H.167 ZN.4: 3 residues within 4Å: Chain B: R.66, E.84, E.86 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:E.86 ZN.5: 2 residues within 4Å: Chain C: D.6, E.9 1 PLIP interactions: 1 interactions with chain C Metal complexes: C:E.9

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 7 residues within 4Å: Chain A: G.100, E.101, I.102, F.103, V.104, N.105 Chain C: Y.7 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ultsch, M. et al., Identification of a Helical Segment within the Intrinsically Disordered Region of the PCSK9 Prodomain. J. Mol. Biol. (2019)

Release Date

2019-04-10

Peptides

6E2 heavy chain: A
6E2 light chain: B
Proprotein convertase subtilisin/kexin type 9: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
H

B
L

C
P

6E2 heavy chain

6E2 light chain

Proprotein convertase subtilisin/kexin type 9

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