SMTL ID : 6e86.1

Solution structure of ZZZ3 ZZ domain in complex with histone H3K4ac peptide

Coordinates

PDB Format

Method

SOLUTION NMR

Oligo State

monomer

Ligands

1 x ALA- ARG- THR- ALY- GLN- THR- ALA- ARG: H3K4ac(Non-covalent)

ALA-ARG-THR-ALY-GLN-THR-ALA-ARG.1: 13 residues within 4Å: Chain A: V.9, G.10, F.11, K.12, C.13, D.14, P.20, P.33, E.34, M.35, S.36, L.37, D.38 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:G.10, A:G.10, A:K.12, A:D.14, A:E.34, A:E.34, A:S.36

2 x ZN: ZINC ION(Non-covalent)

ZN.2: 6 residues within 4Å: Chain A: C.13, N.15, C.16, I.18, C.40, C.43 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.13, A:C.16, A:C.40, A:C.43 ZN.3: 7 residues within 4Å: Chain A: C.28, C.31, L.37, F.39, H.53, K.54, H.57 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.28, A:C.31, A:H.53, A:H.57

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mi, W. et al., The ZZ-type zinc finger of ZZZ3 modulates the ATAC complex-mediated histone acetylation and gene activation. Nat Commun (2018)

Release Date

2018-09-19

Peptides

ZZ-type zinc finger-containing protein 3: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

ZZ-type zinc finger-containing protein 3

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