SMTL ID : 6e8n.1

Crystal structure of glycosylated human EPDR1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.20 Å

Oligo State

homo-dimer

Ligands

2 x 2PE: NONAETHYLENE GLYCOL(Non-covalent)

2PE.1: 10 residues within 4Å: Chain A: Q.16, Q.20, V.40, Y.58, Y.62, Q.84, D.87, L.89, E.125, F.143 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.20, A:Y.62, A:Q.84 2PE.2: 9 residues within 4Å: Chain B: Q.16, Q.20, V.42, Y.58, Y.62, Q.84, D.87, E.125, F.143 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:Q.20, B:Q.84

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wei, Y. et al., Crystal structures of human lysosomal EPDR1 reveal homology with the superfamily of bacterial lipoprotein transporters. Commun Biol (2019)

Release Date

2019-01-23

Peptides

Mammalian ependymin-related protein 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Mammalian ependymin-related protein 1

Related Entries With Identical Sequence