SMTL ID : 6e9w.1

Crystal structure of Rock1 with a pyridinylbenzamide based inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.96 Å

Oligo State

homo-dimer

Ligands

2 x J0P: N-[(2,3-dihydro-1,4-benzodioxin-5-yl)methyl]-4-(pyridin-4-yl)benzamide(Non-covalent)

J0P.1: 18 residues within 4Å: Chain A: I.110, G.113, A.114, F.115, G.116, E.117, V.118, A.131, K.133, L.135, M.181, E.182, Y.183, M.184, L.233, A.243, D.244, F.396 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:I.110, A:V.118, A:L.135, A:L.233 Hydrogen bonds: A:F.115, A:K.133, A:M.184 pi-Cation interactions: A:K.133 J0P.3: 20 residues within 4Å: Chain B: I.110, G.113, A.114, F.115, G.116, E.117, V.118, A.131, K.133, L.134, L.135, E.152, M.181, E.182, Y.183, M.184, L.233, A.243, D.244, F.396 10 PLIP interactions: 10 interactions with chain B Hydrophobic interactions: B:I.110, B:V.118, B:V.118, B:L.135, B:L.233 Hydrogen bonds: B:F.115, B:G.116, B:M.184 Water bridges: B:R.112 pi-Cation interactions: B:K.133

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 3 residues within 4Å: Chain A: Y.169, R.431 Chain B: F.35 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.431

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hobson, A.D. et al., Identification of Selective Dual ROCK1 and ROCK2 Inhibitors Using Structure Based Drug Design. J. Med. Chem. (2018)

Release Date

2018-11-14

Peptides

Rho-associated protein kinase 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Rho-associated protein kinase 1