SMTL ID : 6eb3.3 (3 other biounits)

Structural and enzymatic characterization of an esterase from a metagenomic library

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.35 Å

Oligo State

monomer

Ligands

1 x ABU: GAMMA-AMINO-BUTANOIC ACID(Non-covalent)

ABU.1: 5 residues within 4Å: Chain A: G.27, L.28, S.94, M.95, H.245 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:L.28 Hydrogen bonds: A:L.28, A:S.94, A:M.95 Salt bridges: A:H.245

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 3 residues within 4Å: Chain A: P.208, R.265, Q.266 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.265, A:Q.266 SO4.3: 3 residues within 4Å: Chain A: H.106, Y.107 Ligands: EDO.4 1 PLIP interactions: 1 interactions with chain A Water bridges: A:Y.107

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.4: 2 residues within 4Å: Chain A: H.106 Ligands: SO4.3 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.204 EDO.5: 2 residues within 4Å: Chain A: H.172, T.249 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.36, A:W.153 Water bridges: A:R.175

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Guzzo, C.R. et al., Functional and Structural characterisation of an Esterase from Amazonian Dark Soil. To Be Published

Release Date

2019-08-07

Peptides

Est1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

Est1

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