SMTL ID : 6ebt.1

Crystal structure of recombinant mutant N107T of human fumarase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-tetramer

Ligands

10 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 4 residues within 4Å: Chain A: G.38, G.39, V.40 Chain C: R.377 5 PLIP interactions: 3 interactions with chain A, 2 interactions with chain C Hydrogen bonds: A:V.40, C:R.377, C:R.377 Water bridges: A:G.38, A:T.41 GOL.2: 8 residues within 4Å: Chain A: T.103, N.106, N.138, Q.141, S.142, S.143, N.144, A.234 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:N.106, A:N.138, A:S.143, A:S.143 Water bridges: A:N.144 GOL.3: 7 residues within 4Å: Chain B: I.54, R.57, D.81, A.84, E.85, L.256, T.257 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:E.85, B:E.85 GOL.4: 3 residues within 4Å: Chain B: A.251, K.252, A.255 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:K.252 Water bridges: B:K.252 GOL.5: 7 residues within 4Å: Chain B: G.38, G.39, V.40, T.41 Chain D: T.46, P.47, R.377 5 PLIP interactions: 4 interactions with chain D, 1 interactions with chain B Hydrogen bonds: D:T.46, D:T.46, D:R.377, B:V.40 Water bridges: D:T.46 GOL.6: 4 residues within 4Å: Chain A: R.377 Chain C: G.38, G.39, V.40 6 PLIP interactions: 3 interactions with chain C, 3 interactions with chain A Hydrogen bonds: C:V.40, A:R.377, A:R.377 Water bridges: C:G.38, C:T.41, A:T.46 GOL.7: 8 residues within 4Å: Chain C: T.103, N.106, N.138, Q.141, S.142, S.143, N.144, A.234 5 PLIP interactions: 5 interactions with chain C Hydrogen bonds: C:N.106, C:N.138, C:S.143, C:S.143 Water bridges: C:N.144 GOL.8: 7 residues within 4Å: Chain D: I.54, R.57, D.81, A.84, E.85, L.256, T.257 2 PLIP interactions: 2 interactions with chain D Hydrogen bonds: D:E.85 Water bridges: D:D.81 GOL.9: 3 residues within 4Å: Chain D: A.251, K.252, A.255 2 PLIP interactions: 2 interactions with chain D Hydrogen bonds: D:K.252 Water bridges: D:K.252 GOL.10: 7 residues within 4Å: Chain B: T.46, P.47, R.377 Chain D: G.38, G.39, V.40, T.41 5 PLIP interactions: 4 interactions with chain B, 1 interactions with chain D Hydrogen bonds: B:T.46, B:T.46, B:R.377, D:V.40 Water bridges: B:T.46

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ajalla, M.A.A. et al., Crystal structure of recombinant mutant N107T of human fumarase. To Be Published

Release Date

2019-08-21

Peptides

Fumarate hydratase, mitochondrial: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

Fumarate hydratase, mitochondrial