SMTL ID : 6eg2.1

Crystal structure of human BRM in complex with compound 16

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.98 Å

Oligo State

homo-dimer

Ligands

2 x J7J: N-(5-amino-2-chloropyridin-4-yl)-N'-(4-bromo-3-{[3-(hydroxymethyl)phenyl]ethynyl}-1,2-thiazol-5-yl)urea(Non-covalent)

J7J.1: 19 residues within 4Å: Chain A: I.499, I.500, V.516, E.518, H.525, L.529, T.530, L.544, T.546, T.548, P.549, L.550, Q.551, K.553, E.556, L.557, A.559, L.560, F.563 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:I.499, A:E.556 Hydrogen bonds: A:E.518, A:E.518, A:E.518, A:H.525, A:Q.551 J7J.4: 19 residues within 4Å: Chain B: I.499, I.500, V.516, E.518, H.525, L.529, T.530, L.544, T.546, T.548, P.549, L.550, Q.551, K.553, E.556, L.557, A.559, L.560, F.563 8 PLIP interactions: 8 interactions with chain B Hydrophobic interactions: B:I.499, B:E.556 Hydrogen bonds: B:E.518, B:E.518, B:E.518, B:T.530, B:T.546, B:Q.551

4 x IPA: ISOPROPYL ALCOHOL(Non-functional Binders)

IPA.2: 5 residues within 4Å: Chain A: W.578, A.581 Chain B: A.581, P.582 Ligands: IPA.5 2 PLIP interactions: 1 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:W.578, B:A.581 IPA.3: 2 residues within 4Å: Chain A: T.535, H.536 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:H.536 IPA.5: 5 residues within 4Å: Chain A: A.581, P.582 Chain B: W.578, A.581 Ligands: IPA.2 2 PLIP interactions: 1 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:A.581, B:W.578 IPA.6: 2 residues within 4Å: Chain B: T.535, H.536 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Papillon, J.P.N. et al., Discovery of Orally Active Inhibitors of Brahma Homolog (BRM)/SMARCA2 ATPase Activity for the Treatment of Brahma Related Gene 1 (BRG1)/SMARCA4-Mutant Cancers. J. Med. Chem. (2018)

Release Date

2018-10-31

Peptides

Maltose/maltodextrin-binding periplasmic protein,Probable global transcription activator SNF2L2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Maltose/maltodextrin-binding periplasmic protein,Probable global transcription activator SNF2L2

Related Entries With Identical Sequence