SMTL ID : 6egf.1

Crystal structure of the inactive unphosphorylated IRAK4 kinase domain bound to AMP-PNP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.61 Å

Oligo State

monomer

Ligands

1 x ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER(Non-covalent)

ANP.1: 20 residues within 4Å: Chain A: M.34, G.35, E.36, G.37, G.38, V.42, A.53, K.55, Y.104, V.105, Y.106, M.107, S.111, N.153, K.155, A.157, N.158, L.160, D.171 Ligands: MG.4 12 PLIP interactions: 12 interactions with chain A Hydrogen bonds: A:G.38, A:K.55, A:K.55, A:V.105, A:M.107, A:S.111, A:N.153, A:K.155, A:A.157, A:N.158, A:N.158 Salt bridges: A:K.55

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 3 residues within 4Å: Chain A: H.280, E.281, K.282 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.281, A:K.282 Salt bridges: A:H.280 SO4.3: 5 residues within 4Å: Chain A: H.148, H.149, I.150, R.152, R.176 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:I.150, A:R.152 Salt bridges: A:H.149, A:R.176

1 x MG: MAGNESIUM ION(Non-covalent)

MG.4: 5 residues within 4Å: Chain A: A.157, N.158, S.170, D.171 Ligands: ANP.1 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:D.171

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, L. et al., Conformational flexibility and inhibitor binding to unphosphorylated interleukin-1 receptor-associated kinase 4 (IRAK4). J.Biol.Chem. (2019)

Release Date

2019-02-13

Peptides

Interleukin-1 receptor-associated kinase 4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Interleukin-1 receptor-associated kinase 4

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