SMTL ID : 6eim.1

Human STK10 bound to GW683134A

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.43 Å

Oligo State

homo-dimer

Ligands

5 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 10 residues within 4Å: Chain A: P.99, G.100, G.101, I.106, E.109, V.292, A.295, K.296, V.299 Ligands: B6E.5 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.109 Water bridges: A:I.106 EDO.2: 6 residues within 4Å: Chain A: I.258, P.268, Q.272, L.273, E.275, H.276 1 PLIP interactions: 1 interactions with chain A Water bridges: A:Q.272 EDO.3: 5 residues within 4Å: Chain A: K.144, G.146, N.147, F.161, G.162 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:K.144, A:G.162 Water bridges: A:G.146, A:F.161 EDO.4: 5 residues within 4Å: Chain A: E.219, P.220, H.223 Chain B: Y.182, W.183 No protein-ligand interaction detected (PLIP) EDO.6: 3 residues within 4Å: Chain B: N.131, F.132, S.135 1 PLIP interactions: 1 interactions with chain B Water bridges: B:N.131

2 x B6E: ~{N}-[5-[4-[[2-fluoranyl-5-(trifluoromethyl)phenyl]carbamoylamino]phenoxy]-1~{H}-benzimidazol-2-yl]furan-2-carboxamide(Non-covalent)

B6E.5: 28 residues within 4Å: Chain A: L.27, V.35, A.48, K.50, E.66, I.69, L.70, I.78, V.79, I.95, E.96, F.97, C.98, P.99, G.100, G.101, L.133, I.138, H.140, L.149, L.158, A.159, D.160, F.161, V.163, L.168, L.171 Ligands: EDO.1 21 PLIP interactions: 21 interactions with chain A Hydrophobic interactions: A:A.48, A:K.50, A:I.69, A:L.70, A:I.95, A:I.95, A:I.95, A:L.149, A:A.159, A:D.160, A:F.161, A:F.161, A:L.171 Hydrogen bonds: A:E.66, A:E.66, A:C.98, A:C.98, A:C.98, A:G.101, A:D.160 Water bridges: A:K.50 B6E.7: 27 residues within 4Å: Chain B: L.27, V.35, A.48, K.50, E.66, I.69, L.70, C.73, I.78, V.79, I.95, E.96, F.97, C.98, P.99, G.100, G.101, L.133, I.138, H.140, L.149, L.158, A.159, D.160, F.161, L.168, L.171 23 PLIP interactions: 23 interactions with chain B Hydrophobic interactions: B:L.27, B:A.48, B:I.69, B:L.70, B:I.95, B:I.95, B:I.95, B:L.149, B:A.159, B:D.160, B:F.161, B:L.171 Hydrogen bonds: B:E.66, B:E.66, B:E.66, B:C.98, B:C.98, B:C.98, B:G.101, B:D.160 Water bridges: B:G.28, B:K.50 Halogen bonds: B:L.158

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sorrell, F.J. et al., Human STK10 bound to GW683134. To Be Published

Release Date

2017-11-01

Peptides

Serine/threonine-protein kinase 10: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Serine/threonine-protein kinase 10