SMTL ID : 6el2.1

SaFadR_lauroyl_CoA complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-dimer

Ligands

2 x DCC: DODECYL-COA(Non-covalent)

DCC.1: 26 residues within 4Å: Chain A: I.65, F.68, R.70, R.73, Y.74, L.76, K.77, T.80, R.86, V.89, E.90, G.93, M.94, F.97, M.101, Y.107, Y.108, F.111, H.125, K.128, L.129, R.132, Y.133, I.159, A.162, H.163 29 PLIP interactions: 29 interactions with chain A Hydrophobic interactions: A:I.65, A:F.68, A:F.68, A:F.97, A:Y.108, A:Y.108, A:F.111, A:F.111, A:L.129, A:R.132, A:I.159, A:A.162, A:H.163 Hydrogen bonds: A:R.70, A:R.73, A:L.76, A:T.80, A:R.86, A:R.86, A:Y.133, A:Y.133 Salt bridges: A:R.70, A:R.73, A:R.73, A:K.77, A:K.77, A:K.128, A:R.132, A:R.132 DCC.2: 23 residues within 4Å: Chain B: F.68, R.70, R.73, Y.74, L.76, K.77, T.80, R.86, V.89, E.90, G.93, M.94, F.97, Y.107, F.111, H.125, K.128, L.129, R.132, Y.133, I.159, A.162, H.163 21 PLIP interactions: 21 interactions with chain B Hydrophobic interactions: B:F.68, B:F.68, B:L.76, B:F.97, B:F.111, B:L.129, B:I.159, B:H.163 Hydrogen bonds: B:T.80, B:R.86, B:R.86, B:Y.133, B:Y.133 Salt bridges: B:R.73, B:R.73, B:R.73, B:K.77, B:K.77, B:K.128, B:R.132, B:R.132

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, K. et al., A TetR-family transcription factor regulates fatty acid metabolism in the archaeal model organism Sulfolobus acidocaldarius. Nat Commun (2019)

Release Date

2018-10-10

Peptides

Transcriptional regulator TetR family: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Transcriptional regulator TetR family

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