SMTL ID : 6eue.1

Rivastigmine analogue bound to Tc ACHE.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

10 x 1PE: PENTAETHYLENE GLYCOL(Non-functional Binders)

1PE.1: 8 residues within 4Å: Chain A: W.82, G.115, G.116, Y.128, E.197, S.198, F.328, H.438 3 PLIP interactions: 3 interactions with chain A Water bridges: A:G.115, A:Y.128, A:H.438 1PE.2: 5 residues within 4Å: Chain A: Y.68, Y.119, W.277, F.329, Y.332 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Y.119 Water bridges: A:Y.68, A:Y.68 1PE.3: 3 residues within 4Å: Chain A: E.245, R.248, N.251 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.245 1PE.4: 4 residues within 4Å: Chain A: I.294, D.295, G.296, S.302 2 PLIP interactions: 2 interactions with chain A Water bridges: A:S.302, A:S.302 1PE.5: 3 residues within 4Å: Chain A: Q.372, T.374, D.375 3 PLIP interactions: 3 interactions with chain A Water bridges: A:D.375, A:D.375, A:D.375 1PE.8: 8 residues within 4Å: Chain B: W.82, G.115, G.116, Y.128, E.197, S.198, F.328, H.438 2 PLIP interactions: 2 interactions with chain B Water bridges: B:G.115, B:Y.128 1PE.9: 5 residues within 4Å: Chain B: Y.68, Y.119, W.277, F.329, Y.332 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:Y.119 1PE.10: 3 residues within 4Å: Chain B: E.245, R.248, N.251 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:E.245 1PE.11: 4 residues within 4Å: Chain B: I.294, D.295, G.296, S.302 2 PLIP interactions: 2 interactions with chain B Water bridges: B:S.302, B:S.302 1PE.12: 3 residues within 4Å: Chain B: Q.372, T.374, D.375 2 PLIP interactions: 2 interactions with chain B Water bridges: B:D.375, B:D.375

4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.6: 2 residues within 4Å: Chain A: N.57, S.59 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.59 NAG.7: 2 residues within 4Å: Chain A: N.414, L.492 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:L.492 Hydrogen bonds: A:N.414 Water bridges: A:N.414 NAG.13: 2 residues within 4Å: Chain B: N.57, S.59 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:S.59 NAG.14: 2 residues within 4Å: Chain B: N.414, L.492 3 PLIP interactions: 3 interactions with chain B Hydrophobic interactions: B:L.492 Hydrogen bonds: B:N.414 Water bridges: B:N.414

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dighe, S.N. et al., Rivastigmine and metabolite analogues with putative Alzheimer's disease-modifying properties in a Caenorhabditis elegans model. Commun Chem (2019)

Release Date

2018-11-14

Peptides

Acetylcholinesterase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Acetylcholinesterase