SMTL ID : 6evq.1

solution NMR structure of EB1 C terminus (191-260) with a small molecule bound into the SxIP binding site

Coordinates

PDB Format Compare

Method

SOLUTION NMR

Oligo State

homo-dimer

Ligands

2 x C05: (2~{R})-2-[(1-cyclopentyl-1,2,3,4-tetrazol-5-yl)sulfanyl]-~{N}-(furan-2-ylmethyl)propanamide(Non-covalent)

C05.1: 10 residues within 4Å: Chain A: F.28, L.31, R.32, E.35, L.56, Y.57, T.59, I.65 Chain B: F.26, Y.27 4 PLIP interactions: 3 interactions with chain B, 1 interactions with chain A Hydrophobic interactions: B:Y.27, A:L.56 Hydrogen bonds: B:Y.27, B:Y.27 C05.2: 10 residues within 4Å: Chain A: F.26, Y.27 Chain B: F.28, L.31, R.32, E.35, L.56, Y.57, T.59, I.65 4 PLIP interactions: 1 interactions with chain B, 3 interactions with chain A Hydrophobic interactions: B:L.56, A:Y.27 Hydrogen bonds: A:Y.27, A:Y.27

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Almeida, T.B. et al., Targeting SxIP-EB1 interaction: An integrated approach to the discovery of small molecule modulators of dynamic binding sites. Sci Rep (2017)

Release Date

2018-02-07

Peptides

Microtubule-associated protein RP/EB family member 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Microtubule-associated protein RP/EB family member 1

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