SMTL ID : 6ezm.1

Imidazoleglycerol-phosphate dehydratase from Saccharomyces cerevisiae

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-24-mer

Ligands

48 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 6 residues within 4Å: Chain A: H.90, E.94, H.162 Chain M: D.125, H.187 Ligands: 5LD.6 4 PLIP interactions: 3 interactions with chain A, 1 interactions with chain M Metal complexes: A:H.90, A:E.94, A:H.162, M:H.187 MN.2: 5 residues within 4Å: Chain A: H.64, H.186, E.190 Chain E: H.91 Ligands: 5LD.3 4 PLIP interactions: 3 interactions with chain A, 1 interactions with chain E Metal complexes: A:H.64, A:H.186, A:E.190, E:H.91 MN.4: 6 residues within 4Å: Chain A: D.125, H.187 Chain E: H.90, E.94, H.162 Ligands: 5LD.3 4 PLIP interactions: 3 interactions with chain E, 1 interactions with chain A Metal complexes: E:H.90, E:E.94, E:H.162, A:H.187 MN.5: 5 residues within 4Å: Chain A: H.91 Chain M: H.64, H.186, E.190 Ligands: 5LD.6 4 PLIP interactions: 3 interactions with chain M, 1 interactions with chain A Metal complexes: M:H.64, M:H.186, M:E.190, A:H.91 MN.7: 5 residues within 4Å: Chain B: H.64, H.186, E.190 Chain R: H.91 Ligands: 5LD.8 4 PLIP interactions: 3 interactions with chain B, 1 interactions with chain R Metal complexes: B:H.64, B:H.186, B:E.190, R:H.91 MN.9: 6 residues within 4Å: Chain B: H.90, E.94, H.162 Chain V: D.125, H.187 Ligands: 5LD.12 4 PLIP interactions: 3 interactions with chain B, 1 interactions with chain V Metal complexes: B:H.90, B:E.94, B:H.162, V:H.187 MN.10: 6 residues within 4Å: Chain B: D.125, H.187 Chain R: H.90, E.94, H.162 Ligands: 5LD.8 4 PLIP interactions: 3 interactions with chain R, 1 interactions with chain B Metal complexes: R:H.90, R:E.94, R:H.162, B:H.187 MN.11: 5 residues within 4Å: Chain B: H.91 Chain V: H.64, H.186, E.190 Ligands: 5LD.12 4 PLIP interactions: 3 interactions with chain V, 1 interactions with chain B Metal complexes: V:H.64, V:H.186, V:E.190, B:H.91 MN.13: 6 residues within 4Å: Chain C: H.90, E.94, H.162 Chain G: D.125, H.187 Ligands: 5LD.17 4 PLIP interactions: 1 interactions with chain G, 3 interactions with chain C Metal complexes: G:H.187, C:H.90, C:E.94, C:H.162 MN.14: 5 residues within 4Å: Chain C: H.64, H.186, E.190 Chain O: H.91 Ligands: 5LD.15 4 PLIP interactions: 1 interactions with chain O, 3 interactions with chain C Metal complexes: O:H.91, C:H.64, C:H.186, C:E.190 MN.16: 5 residues within 4Å: Chain C: H.91 Chain G: H.64, H.186, E.190 Ligands: 5LD.17 4 PLIP interactions: 1 interactions with chain C, 3 interactions with chain G Metal complexes: C:H.91, G:H.64, G:H.186, G:E.190 MN.18: 6 residues within 4Å: Chain C: D.125, H.187 Chain O: H.90, E.94, H.162 Ligands: 5LD.15 4 PLIP interactions: 3 interactions with chain O, 1 interactions with chain C Metal complexes: O:H.90, O:E.94, O:H.162, C:H.187 MN.19: 6 residues within 4Å: Chain D: H.90, E.94, H.162 Chain T: D.125, H.187 Ligands: 5LD.23 4 PLIP interactions: 3 interactions with chain D, 1 interactions with chain T Metal complexes: D:H.90, D:E.94, D:H.162, T:H.187 MN.20: 5 residues within 4Å: Chain D: H.64, H.186, E.190 Chain X: H.91 Ligands: 5LD.21 4 PLIP interactions: 3 interactions with chain D, 1 interactions with chain X Metal complexes: D:H.64, D:H.186, D:E.190, X:H.91 MN.22: 5 residues within 4Å: Chain D: H.91 Chain T: H.64, H.186, E.190 Ligands: 5LD.23 4 PLIP interactions: 3 interactions with chain T, 1 interactions with chain D Metal complexes: T:H.64, T:H.186, T:E.190, D:H.91 MN.24: 6 residues within 4Å: Chain D: D.125, H.187 Chain X: H.90, E.94, H.162 Ligands: 5LD.21 4 PLIP interactions: 1 interactions with chain D, 3 interactions with chain X Metal complexes: D:H.187, X:H.90, X:E.94, X:H.162 MN.25: 5 residues within 4Å: Chain E: H.64, H.186, E.190 Chain I: H.91 Ligands: 5LD.26 4 PLIP interactions: 3 interactions with chain E, 1 interactions with chain I Metal complexes: E:H.64, E:H.186, E:E.190, I:H.91 MN.27: 6 residues within 4Å: Chain E: D.125, H.187 Chain I: H.90, E.94, H.162 Ligands: 5LD.26 4 PLIP interactions: 3 interactions with chain I, 1 interactions with chain E Metal complexes: I:H.90, I:E.94, I:H.162, E:H.187 MN.28: 5 residues within 4Å: Chain F: H.64, H.186, E.190 Chain S: H.91 Ligands: 5LD.29 4 PLIP interactions: 3 interactions with chain F, 1 interactions with chain S Metal complexes: F:H.64, F:H.186, F:E.190, S:H.91 MN.30: 6 residues within 4Å: Chain F: H.90, E.94, H.162 Chain U: D.125, H.187 Ligands: 5LD.33 4 PLIP interactions: 3 interactions with chain F, 1 interactions with chain U Metal complexes: F:H.90, F:E.94, F:H.162, U:H.187 MN.31: 6 residues within 4Å: Chain F: D.125, H.187 Chain S: H.90, E.94, H.162 Ligands: 5LD.29 4 PLIP interactions: 3 interactions with chain S, 1 interactions with chain F Metal complexes: S:H.90, S:E.94, S:H.162, F:H.187 MN.32: 5 residues within 4Å: Chain F: H.91 Chain U: H.64, H.186, E.190 Ligands: 5LD.33 4 PLIP interactions: 1 interactions with chain F, 3 interactions with chain U Metal complexes: F:H.91, U:H.64, U:H.186, U:E.190 MN.34: 6 residues within 4Å: Chain G: H.90, E.94, H.162 Chain K: D.125, H.187 Ligands: 5LD.36 4 PLIP interactions: 1 interactions with chain K, 3 interactions with chain G Metal complexes: K:H.187, G:H.90, G:E.94, G:H.162 MN.35: 5 residues within 4Å: Chain G: H.91 Chain K: H.64, H.186, E.190 Ligands: 5LD.36 4 PLIP interactions: 1 interactions with chain G, 3 interactions with chain K Metal complexes: G:H.91, K:H.64, K:H.186, K:E.190 MN.37: 6 residues within 4Å: Chain H: H.90, E.94, H.162 Chain Q: D.125, H.187 Ligands: 5LD.38 4 PLIP interactions: 1 interactions with chain Q, 3 interactions with chain H Metal complexes: Q:H.187, H:H.90, H:E.94, H:H.162 MN.39: 5 residues within 4Å: Chain H: H.64, H.186, E.190 Chain W: H.91 Ligands: 5LD.40 4 PLIP interactions: 1 interactions with chain W, 3 interactions with chain H Metal complexes: W:H.91, H:H.64, H:H.186, H:E.190 MN.41: 5 residues within 4Å: Chain H: H.91 Chain Q: H.64, H.186, E.190 Ligands: 5LD.38 4 PLIP interactions: 3 interactions with chain Q, 1 interactions with chain H Metal complexes: Q:H.64, Q:H.186, Q:E.190, H:H.91 MN.42: 6 residues within 4Å: Chain H: D.125, H.187 Chain W: H.90, E.94, H.162 Ligands: 5LD.40 4 PLIP interactions: 1 interactions with chain H, 3 interactions with chain W Metal complexes: H:H.187, W:H.90, W:E.94, W:H.162 MN.43: 5 residues within 4Å: Chain I: H.64, H.186, E.190 Chain M: H.91 Ligands: 5LD.44 4 PLIP interactions: 3 interactions with chain I, 1 interactions with chain M Metal complexes: I:H.64, I:H.186, I:E.190, M:H.91 MN.45: 6 residues within 4Å: Chain I: D.125, H.187 Chain M: H.90, E.94, H.162 Ligands: 5LD.44 4 PLIP interactions: 3 interactions with chain M, 1 interactions with chain I Metal complexes: M:H.90, M:E.94, M:H.162, I:H.187 MN.46: 5 residues within 4Å: Chain J: H.64, H.186, E.190 Chain T: H.91 Ligands: 5LD.47 4 PLIP interactions: 3 interactions with chain J, 1 interactions with chain T Metal complexes: J:H.64, J:H.186, J:E.190, T:H.91 MN.48: 6 residues within 4Å: Chain J: H.90, E.94, H.162 Chain X: D.125, H.187 Ligands: 5LD.51 4 PLIP interactions: 3 interactions with chain J, 1 interactions with chain X Metal complexes: J:H.90, J:E.94, J:H.162, X:H.187 MN.49: 6 residues within 4Å: Chain J: D.125, H.187 Chain T: H.90, E.94, H.162 Ligands: 5LD.47 4 PLIP interactions: 3 interactions with chain T, 1 interactions with chain J Metal complexes: T:H.90, T:E.94, T:H.162, J:H.187 MN.50: 5 residues within 4Å: Chain J: H.91 Chain X: H.64, H.186, E.190 Ligands: 5LD.51 4 PLIP interactions: 3 interactions with chain X, 1 interactions with chain J Metal complexes: X:H.64, X:H.186, X:E.190, J:H.91 MN.52: 6 residues within 4Å: Chain K: H.90, E.94, H.162 Chain O: D.125, H.187 Ligands: 5LD.54 4 PLIP interactions: 3 interactions with chain K, 1 interactions with chain O Metal complexes: K:H.90, K:E.94, K:H.162, O:H.187 MN.53: 5 residues within 4Å: Chain K: H.91 Chain O: H.64, H.186, E.190 Ligands: 5LD.54 4 PLIP interactions: 3 interactions with chain O, 1 interactions with chain K Metal complexes: O:H.64, O:H.186, O:E.190, K:H.91 MN.55: 6 residues within 4Å: Chain L: H.90, E.94, H.162 Chain R: D.125, H.187 Ligands: 5LD.59 4 PLIP interactions: 3 interactions with chain L, 1 interactions with chain R Metal complexes: L:H.90, L:E.94, L:H.162, R:H.187 MN.56: 5 residues within 4Å: Chain L: H.64, H.186, E.190 Chain V: H.91 Ligands: 5LD.57 4 PLIP interactions: 3 interactions with chain L, 1 interactions with chain V Metal complexes: L:H.64, L:H.186, L:E.190, V:H.91 MN.58: 5 residues within 4Å: Chain L: H.91 Chain R: H.64, H.186, E.190 Ligands: 5LD.59 4 PLIP interactions: 3 interactions with chain R, 1 interactions with chain L Metal complexes: R:H.64, R:H.186, R:E.190, L:H.91 MN.60: 6 residues within 4Å: Chain L: D.125, H.187 Chain V: H.90, E.94, H.162 Ligands: 5LD.57 4 PLIP interactions: 1 interactions with chain L, 3 interactions with chain V Metal complexes: L:H.187, V:H.90, V:E.94, V:H.162 MN.61: 5 residues within 4Å: Chain N: H.64, H.186, E.190 Chain Q: H.91 Ligands: 5LD.62 4 PLIP interactions: 3 interactions with chain N, 1 interactions with chain Q Metal complexes: N:H.64, N:H.186, N:E.190, Q:H.91 MN.63: 6 residues within 4Å: Chain N: H.90, E.94, H.162 Chain W: D.125, H.187 Ligands: 5LD.66 4 PLIP interactions: 3 interactions with chain N, 1 interactions with chain W Metal complexes: N:H.90, N:E.94, N:H.162, W:H.187 MN.64: 6 residues within 4Å: Chain N: D.125, H.187 Chain Q: H.90, E.94, H.162 Ligands: 5LD.62 4 PLIP interactions: 1 interactions with chain N, 3 interactions with chain Q Metal complexes: N:H.187, Q:H.90, Q:E.94, Q:H.162 MN.65: 5 residues within 4Å: Chain N: H.91 Chain W: H.64, H.186, E.190 Ligands: 5LD.66 4 PLIP interactions: 3 interactions with chain W, 1 interactions with chain N Metal complexes: W:H.64, W:H.186, W:E.190, N:H.91 MN.67: 6 residues within 4Å: Chain P: H.90, E.94, H.162 Chain S: D.125, H.187 Ligands: 5LD.71 4 PLIP interactions: 1 interactions with chain S, 3 interactions with chain P Metal complexes: S:H.187, P:H.90, P:E.94, P:H.162 MN.68: 5 residues within 4Å: Chain P: H.64, H.186, E.190 Chain U: H.91 Ligands: 5LD.69 4 PLIP interactions: 3 interactions with chain P, 1 interactions with chain U Metal complexes: P:H.64, P:H.186, P:E.190, U:H.91 MN.70: 5 residues within 4Å: Chain P: H.91 Chain S: H.64, H.186, E.190 Ligands: 5LD.71 4 PLIP interactions: 3 interactions with chain S, 1 interactions with chain P Metal complexes: S:H.64, S:H.186, S:E.190, P:H.91 MN.72: 6 residues within 4Å: Chain P: D.125, H.187 Chain U: H.90, E.94, H.162 Ligands: 5LD.69 4 PLIP interactions: 3 interactions with chain U, 1 interactions with chain P Metal complexes: U:H.90, U:E.94, U:H.162, P:H.187

24 x 5LD: [(2R)-2-hydroxy-3-(1H-1,2,4-triazol-1-yl)propyl]phosphonic acid(Non-covalent)

5LD.3: 17 residues within 4Å: Chain A: H.64, L.124, H.186, H.187, E.190, K.194 Chain E: E.14, H.90, H.91, E.94 Chain T: R.116, R.138, S.214, T.215, K.216 Ligands: MN.2, MN.4 6 PLIP interactions: 4 interactions with chain T, 1 interactions with chain A, 1 interactions with chain E Hydrogen bonds: T:R.116, T:R.116, T:R.138, T:T.215, A:K.194 pi-Stacking: E:H.90 5LD.6: 17 residues within 4Å: Chain A: E.14, H.90, H.91, E.94 Chain M: H.64, L.124, H.186, H.187, E.190, K.194 Chain S: R.116, R.138, S.214, T.215, K.216 Ligands: MN.1, MN.5 6 PLIP interactions: 4 interactions with chain S, 1 interactions with chain M, 1 interactions with chain A Hydrogen bonds: S:R.116, S:R.116, S:R.138, S:T.215, M:K.194 pi-Stacking: A:H.90 5LD.8: 17 residues within 4Å: Chain B: H.64, L.124, H.186, H.187, E.190, K.194 Chain M: R.116, R.138, S.214, T.215, K.216 Chain R: E.14, H.90, H.91, E.94 Ligands: MN.7, MN.10 7 PLIP interactions: 5 interactions with chain M, 1 interactions with chain B, 1 interactions with chain R Hydrogen bonds: M:R.116, M:R.116, M:R.138, M:R.138, M:T.215, B:K.194 pi-Stacking: R:H.90 5LD.12: 17 residues within 4Å: Chain B: E.14, H.90, H.91, E.94 Chain P: R.116, R.138, S.214, T.215, K.216 Chain V: H.64, L.124, H.186, H.187, E.190, K.194 Ligands: MN.9, MN.11 6 PLIP interactions: 1 interactions with chain B, 1 interactions with chain V, 4 interactions with chain P pi-Stacking: B:H.90 Hydrogen bonds: V:K.194, P:R.116, P:R.116, P:R.138, P:T.215 5LD.15: 17 residues within 4Å: Chain C: H.64, L.124, H.186, H.187, E.190, K.194 Chain O: E.14, H.90, H.91, E.94 Chain V: R.116, R.138, S.214, T.215, K.216 Ligands: MN.14, MN.18 6 PLIP interactions: 1 interactions with chain O, 4 interactions with chain V, 1 interactions with chain C pi-Stacking: O:H.90 Hydrogen bonds: V:R.116, V:R.116, V:R.138, V:T.215, C:K.194 5LD.17: 17 residues within 4Å: Chain C: E.14, H.90, H.91, E.94 Chain G: H.64, L.124, H.186, H.187, E.190, K.194 Chain U: R.116, R.138, S.214, T.215, K.216 Ligands: MN.13, MN.16 7 PLIP interactions: 5 interactions with chain U, 1 interactions with chain C, 1 interactions with chain G Hydrogen bonds: U:R.116, U:R.116, U:R.138, U:R.138, U:T.215, G:K.194 pi-Stacking: C:H.90 5LD.21: 17 residues within 4Å: Chain D: H.64, L.124, H.186, H.187, E.190, K.194 Chain G: R.116, R.138, S.214, T.215, K.216 Chain X: E.14, H.90, H.91, E.94 Ligands: MN.20, MN.24 8 PLIP interactions: 6 interactions with chain G, 1 interactions with chain X, 1 interactions with chain D Hydrogen bonds: G:R.116, G:R.116, G:R.138, G:R.138, G:T.215, G:K.216, D:K.194 pi-Stacking: X:H.90 5LD.23: 17 residues within 4Å: Chain D: E.14, H.90, H.91, E.94 Chain F: R.116, R.138, S.214, T.215, K.216 Chain T: H.64, L.124, H.186, H.187, E.190, K.194 Ligands: MN.19, MN.22 6 PLIP interactions: 4 interactions with chain F, 1 interactions with chain D, 1 interactions with chain T Hydrogen bonds: F:R.116, F:R.116, F:R.138, F:T.215, T:K.194 pi-Stacking: D:H.90 5LD.26: 17 residues within 4Å: Chain E: H.64, L.124, H.186, H.187, E.190, K.194 Chain I: E.14, H.90, H.91, E.94 Chain Q: R.116, R.138, S.214, T.215, K.216 Ligands: MN.25, MN.27 7 PLIP interactions: 5 interactions with chain Q, 1 interactions with chain I, 1 interactions with chain E Hydrogen bonds: Q:R.116, Q:R.116, Q:R.138, Q:R.138, Q:T.215, E:K.194 pi-Stacking: I:H.90 5LD.29: 17 residues within 4Å: Chain A: R.116, R.138, S.214, T.215, K.216 Chain F: H.64, L.124, H.186, H.187, E.190, K.194 Chain S: E.14, H.90, H.91, E.94 Ligands: MN.28, MN.31 7 PLIP interactions: 5 interactions with chain A, 1 interactions with chain S, 1 interactions with chain F Hydrogen bonds: A:R.116, A:R.116, A:R.138, A:R.138, A:T.215, F:K.194 pi-Stacking: S:H.90 5LD.33: 17 residues within 4Å: Chain D: R.116, R.138, S.214, T.215, K.216 Chain F: E.14, H.90, H.91, E.94 Chain U: H.64, L.124, H.186, H.187, E.190, K.194 Ligands: MN.30, MN.32 6 PLIP interactions: 4 interactions with chain D, 1 interactions with chain F, 1 interactions with chain U Hydrogen bonds: D:R.116, D:R.116, D:R.138, D:T.215, U:K.194 pi-Stacking: F:H.90 5LD.36: 17 residues within 4Å: Chain G: E.14, H.90, H.91, E.94 Chain K: H.64, L.124, H.186, H.187, E.190, K.194 Chain X: R.116, R.138, S.214, T.215, K.216 Ligands: MN.34, MN.35 7 PLIP interactions: 5 interactions with chain X, 1 interactions with chain K, 1 interactions with chain G Hydrogen bonds: X:R.116, X:R.116, X:R.138, X:R.138, X:T.215, K:K.194 pi-Stacking: G:H.90 5LD.38: 17 residues within 4Å: Chain H: E.14, H.90, H.91, E.94 Chain J: R.116, R.138, S.214, T.215, K.216 Chain Q: H.64, L.124, H.186, H.187, E.190, K.194 Ligands: MN.37, MN.41 7 PLIP interactions: 5 interactions with chain J, 1 interactions with chain H, 1 interactions with chain Q Hydrogen bonds: J:R.116, J:R.116, J:R.138, J:R.138, J:T.215, Q:K.194 pi-Stacking: H:H.90 5LD.40: 17 residues within 4Å: Chain H: H.64, L.124, H.186, H.187, E.190, K.194 Chain K: R.116, R.138, S.214, T.215, K.216 Chain W: E.14, H.90, H.91, E.94 Ligands: MN.39, MN.42 6 PLIP interactions: 4 interactions with chain K, 1 interactions with chain H, 1 interactions with chain W Hydrogen bonds: K:R.116, K:R.116, K:R.138, K:T.215, H:K.194 pi-Stacking: W:H.90 5LD.44: 17 residues within 4Å: Chain I: H.64, L.124, H.186, H.187, E.190, K.194 Chain M: E.14, H.90, H.91, E.94 Chain R: R.116, R.138, S.214, T.215, K.216 Ligands: MN.43, MN.45 6 PLIP interactions: 4 interactions with chain R, 1 interactions with chain M, 1 interactions with chain I Hydrogen bonds: R:R.116, R:R.116, R:R.138, R:T.215, I:K.194 pi-Stacking: M:H.90 5LD.47: 17 residues within 4Å: Chain E: R.116, R.138, S.214, T.215, K.216 Chain J: H.64, L.124, H.186, H.187, E.190, K.194 Chain T: E.14, H.90, H.91, E.94 Ligands: MN.46, MN.49 7 PLIP interactions: 5 interactions with chain E, 1 interactions with chain T, 1 interactions with chain J Hydrogen bonds: E:R.116, E:R.116, E:R.138, E:R.138, E:T.215, J:K.194 pi-Stacking: T:H.90 5LD.51: 17 residues within 4Å: Chain H: R.116, R.138, S.214, T.215, K.216 Chain J: E.14, H.90, H.91, E.94 Chain X: H.64, L.124, H.186, H.187, E.190, K.194 Ligands: MN.48, MN.50 6 PLIP interactions: 4 interactions with chain H, 1 interactions with chain J, 1 interactions with chain X Hydrogen bonds: H:R.116, H:R.116, H:R.138, H:T.215, X:K.194 pi-Stacking: J:H.90 5LD.54: 17 residues within 4Å: Chain K: E.14, H.90, H.91, E.94 Chain O: H.64, L.124, H.186, H.187, E.190, K.194 Chain W: R.116, R.138, S.214, T.215, K.216 Ligands: MN.52, MN.53 7 PLIP interactions: 5 interactions with chain W, 1 interactions with chain K, 1 interactions with chain O Hydrogen bonds: W:R.116, W:R.116, W:R.138, W:R.138, W:T.215, O:K.194 pi-Stacking: K:H.90 5LD.57: 17 residues within 4Å: Chain L: H.64, L.124, H.186, H.187, E.190, K.194 Chain O: R.116, R.138, S.214, T.215, K.216 Chain V: E.14, H.90, H.91, E.94 Ligands: MN.56, MN.60 7 PLIP interactions: 1 interactions with chain L, 5 interactions with chain O, 1 interactions with chain V Hydrogen bonds: L:K.194, O:R.116, O:R.116, O:R.138, O:R.138, O:T.215 pi-Stacking: V:H.90 5LD.59: 17 residues within 4Å: Chain L: E.14, H.90, H.91, E.94 Chain N: R.116, R.138, S.214, T.215, K.216 Chain R: H.64, L.124, H.186, H.187, E.190, K.194 Ligands: MN.55, MN.58 7 PLIP interactions: 1 interactions with chain R, 5 interactions with chain N, 1 interactions with chain L Hydrogen bonds: R:K.194, N:R.116, N:R.116, N:R.138, N:R.138, N:T.215 pi-Stacking: L:H.90 5LD.62: 17 residues within 4Å: Chain I: R.116, R.138, S.214, T.215, K.216 Chain N: H.64, L.124, H.186, H.187, E.190, K.194 Chain Q: E.14, H.90, H.91, E.94 Ligands: MN.61, MN.64 7 PLIP interactions: 1 interactions with chain N, 5 interactions with chain I, 1 interactions with chain Q Hydrogen bonds: N:K.194, I:R.116, I:R.116, I:R.138, I:R.138, I:T.215 pi-Stacking: Q:H.90 5LD.66: 17 residues within 4Å: Chain L: R.116, R.138, S.214, T.215, K.216 Chain N: E.14, H.90, H.91, E.94 Chain W: H.64, L.124, H.186, H.187, E.190, K.194 Ligands: MN.63, MN.65 6 PLIP interactions: 4 interactions with chain L, 1 interactions with chain W, 1 interactions with chain N Hydrogen bonds: L:R.116, L:R.116, L:R.138, L:T.215, W:K.194 pi-Stacking: N:H.90 5LD.69: 17 residues within 4Å: Chain C: R.116, R.138, S.214, T.215, K.216 Chain P: H.64, L.124, H.186, H.187, E.190, K.194 Chain U: E.14, H.90, H.91, E.94 Ligands: MN.68, MN.72 7 PLIP interactions: 5 interactions with chain C, 1 interactions with chain U, 1 interactions with chain P Hydrogen bonds: C:R.116, C:R.116, C:R.138, C:R.138, C:T.215, P:K.194 pi-Stacking: U:H.90 5LD.71: 17 residues within 4Å: Chain B: R.116, R.138, S.214, T.215, K.216 Chain P: E.14, H.90, H.91, E.94 Chain S: H.64, L.124, H.186, H.187, E.190, K.194 Ligands: MN.67, MN.70 6 PLIP interactions: 1 interactions with chain S, 1 interactions with chain P, 4 interactions with chain B Hydrogen bonds: S:K.194, B:R.116, B:R.116, B:R.138, B:T.215 pi-Stacking: P:H.90

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rawson, S. et al., Elucidating the structural basis for differing enzyme inhibitor potency by cryo-EM. Proc. Natl. Acad. Sci. U.S.A. (2018)

Release Date

2018-02-07

Peptides

Imidazoleglycerol-phosphate dehydratase: ABCDEFGHIJKLMNOPQRSTUVWX

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
U

B
A

C
B

D
C

E
D

F
E

G
F

H
G

I
H

J
I

K
J

L
K

M
L

N
M

O
N

P
O

Q
P

R
Q

S
R

T
S

U
T

V
V

W
W

X
X

Imidazoleglycerol-phosphate dehydratase