SMTL ID : 6ezy.1

ARABIDOPSIS THALIANA GSTF9, GSH AND GSOH BOUND

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.35 Å

Oligo State

homo-dimer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 5 residues within 4Å: Chain A: L.150, S.151, S.153, K.154, H.190 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:L.150, A:S.153

2 x BR: BROMIDE ION(Non-covalent)

BR.2: 6 residues within 4Å: Chain A: G.7, P.8, H.9, F.10, P.31, V.32 Ligand excluded by PLIP BR.5: 6 residues within 4Å: Chain B: G.7, P.8, H.9, F.10, P.31, V.32 Ligand excluded by PLIP

1 x GSH: GLUTATHIONE(Non-covalent)

GSH.3: 15 residues within 4Å: Chain A: T.104 Chain B: A.11, S.12, R.15, L.34, H.39, K.40, T.52, V.53, P.54, E.65, S.66, R.67, F.171 Ligands: GS8.4 17 PLIP interactions: 16 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:S.12, B:R.15, B:V.53, B:V.53, B:E.65, B:S.66, A:T.104 Water bridges: B:K.40, B:T.52, B:E.65, B:R.67, B:R.67, B:R.67, B:R.67 Salt bridges: B:H.39, B:K.40, B:R.67

1 x GS8: S-Hydroxy-Glutathione(Non-covalent)

GS8.4: 9 residues within 4Å: Chain B: F.10, A.11, L.34, M.35, L.115, F.119, M.123, Y.174 Ligands: GSH.3 3 PLIP interactions: 3 interactions with chain B Hydrophobic interactions: B:L.115 Hydrogen bonds: B:A.11 Water bridges: B:M.35

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tossounian, M.A. et al., Redox-regulated methionine oxidation of Arabidopsis thaliana glutathione transferase Phi9 induces H-site flexibility. Protein Sci. (2019)

Release Date

2018-08-15

Peptides

Glutathione S-transferase F9: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Glutathione S-transferase F9

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