SMTL ID : 6f0e.1

Structure of yeast Sec14p with a picolinamide compound

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

monomer

Ligands

1 x C8K: ~{N}-(1,3-benzodioxol-5-ylmethyl)-5-bromanyl-3-fluoranyl-pyridine-2-carboxamide(Non-covalent)

C8K.1: 13 residues within 4Å: Chain A: Y.159, V.162, S.181, T.183, M.185, V.202, A.205, S.206, S.209, Y.213, R.216, M.217, F.220 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:T.183, A:Y.213, A:R.216 Hydrogen bonds: A:Y.159, A:S.181, A:T.183, A:S.209 pi-Stacking: A:Y.159, A:F.220 Halogen bonds: A:Y.159

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pries, V. et al., Target Identification and Mechanism of Action of Picolinamide and Benzamide Chemotypes with Antifungal Properties. Cell Chem Biol (2018)

Release Date

2018-01-17

Peptides

SEC14 cytosolic factor: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

SEC14 cytosolic factor

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