SMTL ID : 6f19.1

Structure of Mb NMH H64V, V68A mutant complex with EDA incubated at room temperature for 5 min

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.89 Å

Oligo State

monomer

Ligands

1 x EEE: ETHYL ACETATE(Non-covalent)

EEE.1: 5 residues within 4Å: Chain A: F.43, V.64, T.67, A.68 Ligands: HEM.2 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:F.43, A:V.64, A:T.67

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.2: 18 residues within 4Å: Chain A: T.39, K.42, F.43, R.45, T.67, A.68, A.71, L.72, L.89, S.92, H.93, H.97, I.99, Y.103, L.104, I.107, F.138 Ligands: EEE.1 19 PLIP interactions: 19 interactions with chain A, Hydrophobic interactions: A:K.42, A:F.43, A:F.43, A:A.71, A:L.72, A:L.89, A:L.89, A:I.99, A:I.99, A:Y.103, A:L.104, A:I.107, A:I.107, A:F.138 Hydrogen bonds: A:S.92, A:S.92 Salt bridges: A:R.45, A:K.96, A:H.97

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hayashi, T. et al., Capture and characterization of a reactive haem-carbenoid complex in an artificial metalloenzyme. Nat Catal (2018)

Release Date

2018-08-22

Peptides

Myoglobin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Myoglobin

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