- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 4.20 Å
- Oligo State
- hetero-2-2-mer
- Ligands
- 1 x NAG- NAG- BMA- MAN- GAL- MAN: beta-D-galactopyranose-(1-4)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
- 1 x NAG- NAG- BMA- MAN- MAN: alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
- 2 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
- 12 x CA: CALCIUM ION(Non-covalent)
- 6 x NA: SODIUM ION(Non-functional Binders)
NA.8: 7 residues within 4Å:- Chain A: S.190, L.191, E.192, Y.193, R.195, Y.197, R.279
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:R.195
NA.13: 7 residues within 4Å:- Chain B: S.190, L.191, E.192, Y.193, R.195, Y.197, R.279
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:L.191
NA.16: 7 residues within 4Å:- Chain C: S.174, P.175, Y.177, K.179, P.180, Y.181, K.266
1 PLIP interactions:1 interactions with chain C- Hydrogen bonds: C:K.266
NA.19: 7 residues within 4Å:- Chain C: S.10, P.11, N.12, Y.13, Q.15, Y.17, T.106
1 PLIP interactions:1 interactions with chain C- Hydrogen bonds: C:N.12
NA.21: 7 residues within 4Å:- Chain D: S.10, P.11, N.12, Y.13, Q.15, Y.17, T.106
1 PLIP interactions:1 interactions with chain D- Hydrogen bonds: D:N.12
NA.24: 7 residues within 4Å:- Chain D: S.174, P.175, Y.177, K.179, P.180, Y.181, K.266
1 PLIP interactions:1 interactions with chain D- Hydrogen bonds: D:K.266
- 2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
-
Almitairi, J.O.M. et al., Structure of the C1r-C1s interaction of the C1 complex of complement activation. Proc. Natl. Acad. Sci. U.S.A. (2018)
- Release Date
- 2018-01-17
- Peptides
- Complement C1r subcomponent: AB
Complement C1s subcomponent: CD - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
CC
DD
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 4.20 Å
- Oligo State
- hetero-2-2-mer
- Ligands
- 1 x NAG- NAG- BMA- MAN- GAL- MAN: beta-D-galactopyranose-(1-4)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
- 1 x NAG- NAG- BMA- MAN- MAN: alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
- 2 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
- 12 x CA: CALCIUM ION(Non-covalent)
- 6 x NA: SODIUM ION(Non-functional Binders)
- 2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
-
Almitairi, J.O.M. et al., Structure of the C1r-C1s interaction of the C1 complex of complement activation. Proc. Natl. Acad. Sci. U.S.A. (2018)
- Release Date
- 2018-01-17
- Peptides
- Complement C1r subcomponent: AB
Complement C1s subcomponent: CD - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
CC
DD
B