SMTL ID : 6f59.1

Crystal structure of human Brachyury (T) G177D variant in complex with DNA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.15 Å

Oligo State

homo-dimer

Ligands

1 x NA: SODIUM ION(Non-functional Binders)

NA.1: 6 residues within 4Å: Chain C: K.28, N.29, T.111, K.113, N.115, Q.119 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:T.111, C:N.115, C:N.115

1 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.2: 7 residues within 4Å: Chain C: L.44, Y.50, I.134, V.135, R.136, M.143, T.145 4 PLIP interactions: 4 interactions with chain C Hydrophobic interactions: C:L.44, C:Y.50, C:I.134, C:T.145

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Newman, J.A. et al., Crystal structure of human Brachyury (T) G177D variant in complex with DNA. To Be Published

Release Date

2017-12-13

Peptides

Brachyury protein: CD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

C
A

D
B

Brachyury protein

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