SMTL ID : 6f86.1

Crystal Structure of E. coli GyraseB 24kDa in complex with 4-(4-bromo-1H-pyrazol-1-yl)-6-[(ethylcarbamoyl)amino]-N-(pyridin-3-yl)pyridine-3-carboxamide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x CWW: 4-(4-bromanylpyrazol-1-yl)-6-(ethylcarbamoylamino)-~{N}-pyridin-3-yl-pyridine-3-carboxamide(Non-covalent)

CWW.1: 14 residues within 4Å: Chain A: V.29, N.32, A.33, E.36, V.57, D.59, R.62, G.63, I.64, P.65, I.80, R.122, T.151, V.153 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:V.29, A:V.57, A:I.64 Hydrogen bonds: A:N.32, A:D.59, A:D.59, A:R.62, A:G.63, A:T.151 Water bridges: A:G.63

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Narramore, S. et al., New insights into the binding mode of pyridine-3-carboxamide inhibitors of E. coli DNA gyrase. Bioorg.Med.Chem. (2019)

Release Date

2019-06-26

Peptides

DNA gyrase subunit B: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

DNA gyrase subunit B