SMTL ID : 6f96.1

Crystal Structure of E. coli GyraseB 24kDa in complex with 6-[(ethylcarbamoyl)amino]-4-[(4-methoxyphenyl)amino]-N-(pyridin-3-yl)pyridine-3-carboxamide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

1 x D0K: 6-(ethylcarbamoylamino)-4-[(4-methoxyphenyl)amino]-~{N}-pyridin-3-yl-pyridine-3-carboxamide(Non-covalent)

D0K.1: 13 residues within 4Å: Chain A: V.44, N.47, A.48, E.51, V.72, D.74, R.77, G.78, I.79, P.80, I.95, R.137, T.166 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:V.44, A:V.72, A:I.79, A:I.95 Hydrogen bonds: A:N.47, A:D.74, A:D.74, A:G.78, A:T.166 Water bridges: A:G.78

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Narramore, S. et al., New insights into the binding mode of pyridine-3-carboxamide inhibitors of E. coli DNA gyrase. Bioorg.Med.Chem. (2019)

Release Date

2019-01-30

Peptides

DNA gyrase subunit B: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

DNA gyrase subunit B

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