SMTL ID : 6f97.1

Crystal structure of the V465T mutant of 5-(Hydroxymethyl)furfural Oxidase (HMFO)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-dimer

Ligands

2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.1: 37 residues within 4Å: Chain A: G.12, G.13, G.14, T.15, A.16, I.35, E.36, A.37, R.60, W.68, E.90, G.92, R.93, L.94, G.97, G.98, S.99, V.101, N.102, M.103, V.104, V.105, S.231, R.232, V.233, T.265, A.266, G.267, Q.270, W.466, H.467, D.500, A.501, N.511, T.512, N.513, T.516 29 PLIP interactions: 29 interactions with chain A Hydrophobic interactions: A:N.102, A:W.466, A:W.466, A:W.466 Hydrogen bonds: A:T.15, A:T.15, A:A.16, A:A.37, A:G.92, A:G.98, A:S.99, A:N.102, A:M.103, A:V.105, A:V.105, A:V.233, A:V.233, A:W.466, A:A.501, A:N.511, A:T.512, A:N.513, A:N.513, A:L.514 Water bridges: A:G.14, A:G.17, A:G.92, A:A.268, A:N.513 FAD.2: 31 residues within 4Å: Chain B: G.12, G.14, T.15, A.16, I.35, E.36, A.37, W.68, E.90, G.92, R.93, L.94, G.97, G.98, S.99, V.104, V.105, S.231, R.232, V.233, T.265, A.266, G.267, Q.270, W.466, D.500, A.501, N.511, T.512, N.513, T.516 27 PLIP interactions: 27 interactions with chain B Hydrophobic interactions: B:W.466 Hydrogen bonds: B:T.15, B:T.15, B:A.16, B:A.37, B:G.92, B:L.94, B:L.94, B:G.98, B:G.98, B:S.99, B:V.104, B:V.105, B:V.105, B:V.233, B:V.233, B:W.466, B:A.501, B:T.512, B:N.513, B:N.513, B:L.514 Water bridges: B:G.14, B:G.17, B:N.511, B:N.511, B:T.512

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pickl, M. et al., Kinetic Resolution of sec-Thiols by Enantioselective Oxidation with Rationally Engineered 5-(Hydroxymethyl)furfural Oxidase. Angew. Chem. Int. Ed. Engl. (2018)

Release Date

2018-02-14

Peptides

5-(hydroxymethyl)furfural oxidase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

5-(hydroxymethyl)furfural oxidase