SMTL ID : 6fat.2 (1 other biounit)

The crystal structure of a feruloyl esterase C from Fusarium oxysporum.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 5 residues within 4Å: Chain A: N.31, T.33, K.44, S.45, I.47 No protein-ligand interaction detected (PLIP)

1 x NAG- NAG- BMA- MAN- MAN- MAN- MAN: alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA-MAN-MAN-MAN-MAN.2: 9 residues within 4Å: Chain A: W.21, F.22, D.36, N.37, A.56, N.66, T.68, E.70, N.116 No protein-ligand interaction detected (PLIP)

1 x NAG- NAG- BMA- MAN- MAN- MAN- MAN- MAN- MAN- MAN- MAN: alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-2)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA-MAN-MAN-MAN-MAN-MAN-MAN-MAN-MAN.3: 16 residues within 4Å: Chain A: S.127, V.324, I.325, W.326, N.327, K.343, S.345, E.346, V.347, N.348, P.349, F.350, N.351, E.353, W.355, E.356 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:F.350 Water bridges: A:K.343, A:F.350

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.4: 5 residues within 4Å: Chain A: P.63, K.64, N.66, G.114, V.129 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.66

1 x CA: CALCIUM ION(Non-covalent)

CA.5: 5 residues within 4Å: Chain A: D.235, D.239, V.241, D.243, I.245 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.239, A:V.241, A:D.243, A:I.245, H2O.4

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dimarogona, M. et al., The crystal structure of a Fusarium oxysporum feruloyl esterase that belongs to the tannase family. Febs Lett. (2020)

Release Date

2019-01-30

Peptides

Carboxylic ester hydrolase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Carboxylic ester hydrolase

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