SMTL ID : 6fcj.1

Estimation of Protein-Ligand Unbinding Kinetics Using Non-Equilibrium Targeted Molecular Dynamics Simulations

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.49 Å

Oligo State

monomer

Ligands

1 x D4W: 4-[2-(2-chlorophenyl)pyrazol-3-yl]benzene-1,3-diol(Non-covalent)

D4W.1: 14 residues within 4Å: Chain A: L.41, N.44, S.45, D.47, A.48, D.86, I.89, G.90, M.91, L.100, T.102, F.131, T.177, V.179 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:N.44, A:A.48, A:T.102, A:F.131 Hydrogen bonds: A:N.44 Water bridges: A:D.86, A:T.177

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wolf, S. et al., Estimation of Protein-Ligand Unbinding Kinetics Using Non-Equilibrium Targeted Molecular Dynamics Simulations. Arxiv (2019)

Release Date

2019-01-30

Peptides

Heat shock protein HSP 90-alpha: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Heat shock protein HSP 90-alpha

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