SMTL ID : 6fgg.1

Crystal Structure of BAZ2A bromodomain in complex with 1-methylpyridinone compound 5

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.10 Å

Oligo State

monomer

Ligands

1 x D9B: ~{N}-[3-[2-(dimethylamino)ethyl]-2-oxidanylidene-1,3-benzoxazol-5-yl]-1-methyl-6-oxidanylidene-pyridine-3-carboxamide(Non-covalent)

D9B.1: 11 residues within 4Å: Chain A: W.23, P.24, F.25, V.29, V.34, Y.37, C.76, F.79, N.80, E.85, V.86 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:F.79 Hydrogen bonds: A:N.80 Water bridges: A:P.24, A:Y.37 pi-Stacking: A:W.23, A:W.23

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dalle Vedove, A. et al., Structural Analysis of Small-Molecule Binding to the BAZ2A and BAZ2B Bromodomains. ChemMedChem (2018)

Release Date

2018-05-30

Peptides

Bromodomain adjacent to zinc finger domain protein 2A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bromodomain adjacent to zinc finger domain protein 2A

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