SMTL ID : 6fgj.1 (1 other biounit)

Crystal structure of the small alarmone synthethase 2 from Staphylococcus aureus

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.25 Å

Oligo State

homo-tetramer

Ligands

4 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)

PGE.1: 7 residues within 4Å: Chain A: Y.149, K.154, N.156, Y.158, H.162, E.196, R.200 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.154, A:N.156 PGE.2: 7 residues within 4Å: Chain B: Y.149, K.154, N.156, Y.158, H.162, E.196, R.200 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:K.154, B:N.156 PGE.3: 6 residues within 4Å: Chain C: Y.149, K.154, N.156, Y.158, E.196, R.200 4 PLIP interactions: 4 interactions with chain C Hydrogen bonds: C:K.154, C:N.156, C:R.200, C:R.200 PGE.4: 6 residues within 4Å: Chain D: Y.149, K.154, N.156, Y.158, E.196, R.200 4 PLIP interactions: 4 interactions with chain D Hydrogen bonds: D:K.154, D:N.156, D:R.200, D:R.200

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Steinchen, W. et al., Structural and mechanistic divergence of the small (p)ppGpp synthetases RelP and RelQ. Sci Rep (2018)

Release Date

2018-02-07

Peptides

GTP pyrophosphokinase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
B

D
B

GTP pyrophosphokinase

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