SMTL ID : 6fgy.1

Crystal Structure of Human BACE-1 in Complex with amino-1,4-oxazine compound 4

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.54 Å

Oligo State

monomer

Ligands

1 x D9W: ~{N}-[3-[(3~{R})-5-azanyl-3-methyl-2,6-dihydro-1,4-oxazin-3-yl]phenyl]-5-bromanyl-pyridine-2-carboxamide(Non-covalent)

D9W.1: 18 residues within 4Å: Chain A: G.15, Q.16, G.17, L.34, D.36, G.38, S.39, Y.75, F.112, I.114, W.119, I.122, D.232, S.233, G.234, T.235, T.236, A.339 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:Y.75, A:Y.75, A:F.112, A:I.122 Hydrogen bonds: A:D.36, A:G.234

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Veenstra, S.J. et al., Discovery of amino-1,4-oxazines as potent BACE-1 inhibitors. Bioorg. Med. Chem. Lett. (2018)

Release Date

2018-06-06

Peptides

Beta-secretase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Beta-secretase 1