SMTL ID : 6fh8.1

E. coli surface display of streptavidin for directed evolution of an allylic deallocase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.64 Å

Oligo State

homo-tetramer

Ligands

4 x JCT: biotinylated ruthenium cyclopentadienide(Non-covalent)

JCT.1: 21 residues within 4Å: Chain A: N.23, L.25, S.27, Y.43, S.45, V.47, G.48, N.49, W.79, S.88, T.90, W.92, W.108, L.110, M.112, A.121, S.122, T.123, L.124, D.128 Chain C: W.120 13 PLIP interactions: 13 interactions with chain A, Hydrophobic interactions: A:W.79, A:W.79, A:L.110, A:L.110, A:M.112, A:L.124, A:L.124 Hydrogen bonds: A:N.23, A:S.27, A:Y.43, A:S.45, A:N.49, A:D.128 JCT.2: 21 residues within 4Å: Chain B: N.23, L.25, S.27, Y.43, S.45, V.47, G.48, N.49, W.79, S.88, T.90, W.92, W.108, L.110, M.112, A.121, S.122, T.123, L.124, D.128 Chain D: W.120 12 PLIP interactions: 12 interactions with chain B, Hydrophobic interactions: B:W.79, B:W.79, B:L.110, B:L.110, B:M.112, B:L.124, B:L.124 Hydrogen bonds: B:N.23, B:S.27, B:S.45, B:N.49, B:D.128 JCT.3: 21 residues within 4Å: Chain A: W.120 Chain C: N.23, L.25, S.27, Y.43, S.45, V.47, G.48, N.49, W.79, S.88, T.90, W.92, W.108, L.110, M.112, A.121, S.122, T.123, L.124, D.128 13 PLIP interactions: 13 interactions with chain C, Hydrophobic interactions: C:W.79, C:W.79, C:L.110, C:L.110, C:M.112, C:L.124, C:L.124 Hydrogen bonds: C:N.23, C:S.27, C:Y.43, C:S.45, C:N.49, C:D.128 JCT.4: 21 residues within 4Å: Chain B: W.120 Chain D: N.23, L.25, S.27, Y.43, S.45, V.47, G.48, N.49, W.79, S.88, T.90, W.92, W.108, L.110, M.112, A.121, S.122, T.123, L.124, D.128 12 PLIP interactions: 12 interactions with chain D, Hydrophobic interactions: D:W.79, D:W.79, D:L.110, D:L.110, D:M.112, D:L.124, D:L.124 Hydrogen bonds: D:N.23, D:S.27, D:S.45, D:N.49, D:D.128

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Heinisch, T. et al., E. colisurface display of streptavidin for directed evolution of an allylic deallylase. Chem Sci (2018)

Release Date

2018-08-22

Peptides

Streptavidin: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

Streptavidin