SMTL ID : 6fic.1

Bivalent Inhibitor UNC4512 Bound to the TAF1 Bromodomain Tandem

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.18 Å

Oligo State

monomer

Ligands

2 x DKH: 3-azanyl-2-[3-[2-[2-[2-[2-[2-[2-[2-[2-[2-[2-[2-[2-[2-[2-[2-[2-[2-[[3-azanyl-1-[[2-[[3-methyl-6-[4-methyl-3-(methylsulfonyl-$l^{2}-azanyl)cyclohexa-1,3,5-trien-1-yl]-[1,2,4]triazolo[4,3-b]pyridazin-8-yl]-$l^{2}-azanyl]-2-oxidanylidene-ethyl]amino]-1-oxidanylidene-propan-2-yl]amino]-2-oxidanylidene-ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]propanoylamino]-~{N}-[3-[[3-methyl-6-[4-methyl-3-(methylsulfonylamino)phenyl]-[1,2,4]triazolo[4,3-b]pyridazin-8-yl]amino]-3-oxidanylidene-propyl]propanamide(Non-covalent)

DKH.1: 13 residues within 4Å: Chain A: P.46, F.47, T.49, P.50, V.51, N.52, V.55, V.56, Y.59, Y.101, N.102, H.106, L.108 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:P.46, A:F.47, A:V.51, A:V.55, A:V.56 Hydrogen bonds: A:N.52, A:N.102, A:N.102, A:H.106 Water bridges: A:N.52 DKH.2: 11 residues within 4Å: Chain A: P.169, F.170, H.172, P.173, V.174, N.175, F.178, V.179, Y.224, N.225, Y.231 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:P.169, A:F.170, A:V.174, A:F.178, A:V.179, A:Y.231 Hydrogen bonds: A:N.175, A:N.225, A:N.225, A:Y.231 pi-Stacking: A:Y.182, A:Y.231, A:Y.231

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mathea, S. et al., Bivalent Inhibitor UNC4512 Bound to the TAF1 Bromodomain Tandem. To Be Published

Release Date

2018-01-31

Peptides

Transcription initiation factor TFIID subunit 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
T

Transcription initiation factor TFIID subunit 1

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