SMTL ID : 6fie.1

Crystallographic structure of calcium loaded Calbindin-D28K.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.51 Å

Oligo State

monomer

Ligands

4 x CA: CALCIUM ION(Non-covalent)

CA.1: 7 residues within 4Å: Chain A: D.202, D.204, N.206, Y.208, I.209, D.210, E.213 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.202, A:D.204, A:Y.208, A:E.213, H2O.2 CA.2: 7 residues within 4Å: Chain A: D.114, D.116, S.118, F.120, I.121, E.122, E.125 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:D.114, A:D.116, A:S.118, A:F.120, A:E.122 CA.3: 7 residues within 4Å: Chain A: D.158, N.160, D.162, K.164, L.165, E.166, E.169 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.158, A:D.162, A:K.164, A:E.169, H2O.2 CA.4: 6 residues within 4Å: Chain A: D.27, D.29, S.31, Y.33, L.34, E.38 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:D.27, A:D.29, A:S.31, A:Y.33, A:E.38

1 x SCN: THIOCYANATE ION(Non-functional Binders)

SCN.5: 3 residues within 4Å: Chain A: N.206, Y.208, K.249 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.206

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Noble, J.W. et al., The X-ray structure of human calbindin-D28K: an improved model. Acta Crystallogr D Struct Biol (2018)

Release Date

2018-10-10

Peptides

Calbindin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Calbindin