SMTL ID : 6fif.1

Crystal structure of the BRI1 Gly644-Asp (bri1-6) mutant from Arabidopsis thaliana.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.54 Å

Oligo State

monomer

Ligands

2 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 5 residues within 4Å: Chain A: S.253, N.275, S.277, S.278, Y.295 No protein-ligand interaction detected (PLIP) NAG-NAG.2: 1 residues within 4Å: Chain A: N.112 No protein-ligand interaction detected (PLIP)

1 x NAG- NAG- FUC: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-FUC.3: 1 residues within 4Å: Chain A: N.573 No protein-ligand interaction detected (PLIP)

1 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA.4: 9 residues within 4Å: Chain A: N.521, N.545, E.608, H.610, S.630, T.631, R.632, N.633, P.634 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.630

4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.5: 2 residues within 4Å: Chain A: K.211, N.233 No protein-ligand interaction detected (PLIP) NAG.6: 3 residues within 4Å: Chain A: N.351, S.353, E.376 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.351, A:S.353 NAG.7: 4 residues within 4Å: Chain A: N.652, N.653, Y.679, R.702 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Y.679 NAG.8: 4 residues within 4Å: Chain A: M.485, Y.486, K.488, N.510 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:Y.486 Hydrogen bonds: A:K.488, A:N.510

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.9: 6 residues within 4Å: Chain A: S.31, L.32, E.35, K.73, V.74, T.99 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:V.74

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hohmann, U. et al., Mechanistic basis for the activation of plant membrane receptor kinases by SERK-family coreceptors. Proc. Natl. Acad. Sci. U.S.A. (2018)

Release Date

2018-01-31

Peptides

Protein BRASSINOSTEROID INSENSITIVE 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Protein BRASSINOSTEROID INSENSITIVE 1