SMTL ID : 6flr.1

Super-open structure of the AMPAR GluA3 N-terminal domain

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.51 Å

Oligo State

homo-dimer

Ligands

5 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Non-covalent)(Post Translational Modification)

NAG.1: 3 residues within 4Å: Chain A: N.35, T.37, E.38 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.35 NAG.2: 4 residues within 4Å: Chain A: Q.334, N.341, Q.343, N.352 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.352 NAG.3: 4 residues within 4Å: Chain A: R.188, G.214, H.216, N.238 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:R.188, A:H.216 Hydrogen bonds: A:R.188, A:H.216, A:N.238, A:N.238 NAG.4: 4 residues within 4Å: Chain B: Q.334, N.341, Q.343, N.352 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:Q.334, B:Q.343, B:N.352 NAG.5: 5 residues within 4Å: Chain B: R.188, G.214, Y.215, H.216, N.238 2 PLIP interactions: 2 interactions with chain B Hydrophobic interactions: B:R.188 Hydrogen bonds: B:N.238

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lee, J.Y. et al., Druggability Simulations and X-Ray Crystallography Reveal a Ligand-Binding Site in the GluA3 AMPA Receptor N-Terminal Domain. Structure (2019)

Release Date

2018-12-19

Peptides

Glutamate receptor 3: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Glutamate receptor 3

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