SMTL ID : 6fni.1

Crystal Structure of Ephrin B4 (EphB4) Receptor Protein Kinase with NVP-BHG712

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.47 Å

Oligo State

monomer

Ligands

1 x DXH: 4-methyl-3-[(1-methyl-6-pyridin-3-yl-pyrazolo[3,4-d]pyrimidin-4-yl)amino]-~{N}-[3-(trifluoromethyl)phenyl]benzamide(Non-covalent)

DXH.1: 25 residues within 4Å: Chain A: I.26, A.28, V.34, A.50, K.52, E.69, M.73, F.76, I.81, I.82, T.98, E.99, F.100, M.101, L.136, Y.141, H.143, L.152, V.161, S.162, D.163, F.164, S.167, R.168, F.169 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:V.34, A:A.50, A:K.52, A:E.69, A:T.98, A:L.152, A:D.163 Hydrogen bonds: A:E.69, A:T.98, A:T.98, A:M.101, A:D.163 pi-Stacking: A:F.169

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Troster, A. et al., NVP-BHG712: Effects of Regioisomers on the Affinity and Selectivity toward the EPHrin Family. ChemMedChem (2018)

Release Date

2018-08-08

Peptides

Ephrin type-B receptor 4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Ephrin type-B receptor 4

Related Entries With Identical Sequence