SMTL ID : 6fpz.1 (1 other biounit)

Inter-alpha-inhibitor heavy chain 1, D298A

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

5 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 14 residues within 4Å: Chain A: R.53, Q.188, V.250, S.251, R.252, K.254, I.255, C.256, D.257, F.268, F.269, A.270, P.271, E.496 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:R.53, A:R.252, A:I.255, A:D.257, A:A.270, A:A.270 Water bridges: A:S.251, A:C.256, A:D.257 GOL.2: 7 residues within 4Å: Chain A: K.305, I.306, D.309, Q.457, G.458, Y.460, S.461 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:D.309, A:D.309, A:Q.457, A:Q.457 GOL.3: 4 residues within 4Å: Chain A: R.502, E.551, D.587, Y.588 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:D.587 Water bridges: A:R.502, A:D.587, A:D.587 GOL.4: 10 residues within 4Å: Chain A: R.600, G.601, M.602, A.603, G.607, K.609, S.634, A.635, L.636, Q.637 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.601, A:G.607, A:Q.637 Water bridges: A:R.600 GOL.5: 10 residues within 4Å: Chain A: I.41, L.44, S.61, V.63, A.74, F.75, D.76, L.77, F.148, P.171 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.61, A:D.76, A:D.76

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Briggs, D.C. et al., Inter-alpha-inhibitor heavy chain-1 has an integrin-like 3D structure mediating immune regulatory activities and matrix stabilization during ovulation. J.Biol.Chem. (2020)

Release Date

2019-02-27

Peptides

Inter-alpha-trypsin inhibitor heavy chain H1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Inter-alpha-trypsin inhibitor heavy chain H1

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