SMTL ID : 6fu6.1

Phosphotriesterase PTE_C23_2

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

homo-dimer

Ligands

2 x FMT: FORMIC ACID(Non-functional Binders)

FMT.1: 11 residues within 4Å: Chain A: H.22, H.24, V.68, I.73, W.98, K.136, H.168, H.197 Ligands: ZN.2, ZN.3, TA8.4 No protein-ligand interaction detected (PLIP) FMT.6: 10 residues within 4Å: Chain B: H.22, H.24, V.68, W.98, K.136, H.168, H.197 Ligands: ZN.7, ZN.8, TA8.9 No protein-ligand interaction detected (PLIP)

5 x ZN: ZINC ION(Non-covalent)

ZN.2: 6 residues within 4Å: Chain A: H.22, H.24, D.268 Ligands: FMT.1, ZN.3, TA8.4 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.22, A:H.24, A:D.268 ZN.3: 6 residues within 4Å: Chain A: W.98, H.168, H.197 Ligands: FMT.1, ZN.2, TA8.4 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:H.168, A:H.197 ZN.5: 3 residues within 4Å: Chain B: V.308, S.309, T.312 No protein-ligand interaction detected (PLIP) ZN.7: 6 residues within 4Å: Chain B: H.22, H.24, D.268 Ligands: FMT.6, ZN.8, TA8.9 3 PLIP interactions: 3 interactions with chain B Metal complexes: B:H.22, B:H.24, B:D.268 ZN.8: 6 residues within 4Å: Chain B: W.98, H.168, H.197 Ligands: FMT.6, ZN.7, TA8.9 2 PLIP interactions: 2 interactions with chain B Metal complexes: B:H.168, B:H.197

2 x TA8: POLYACRYLIC ACID(Non-covalent)

TA8.4: 11 residues within 4Å: Chain A: H.22, H.24, W.98, H.168, H.197, H.224, D.268, F.273 Ligands: FMT.1, ZN.2, ZN.3 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:F.273 Salt bridges: A:H.22, A:H.24, A:K.136, A:H.168, A:H.197, A:H.224 TA8.9: 12 residues within 4Å: Chain B: H.22, H.24, W.98, H.168, H.197, H.224, L.238, D.268, F.273 Ligands: FMT.6, ZN.7, ZN.8 9 PLIP interactions: 9 interactions with chain B Hydrophobic interactions: B:F.273 Hydrogen bonds: B:D.268 Salt bridges: B:H.22, B:H.24, B:K.136, B:H.168, B:H.197, B:H.197, B:H.224

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dym, O. et al., PhosphotriesterasePTE_A53_4. To Be Published

Release Date

2019-03-20

Peptides

Parathion hydrolase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Parathion hydrolase

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