SMTL ID : 6fvn.2 (1 other biounit)

DNA polymerase sliding clamp from Mycobacterium tuberculosis with bound P7 peptide

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.14 Å

Oligo State

homo-dimer

Ligands

2 x ACE- GLN- ALC- ASP- LEU- PHE: P7 peptide(Non-covalent)

ACE-GLN-ALC-ASP-LEU-PHE.1: 8 residues within 4Å: Chain A: R.183, F.184, L.186, P.362, M.396, P.397, V.398, R.399 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:F.184, A:L.186, A:P.362, A:V.398 Hydrogen bonds: A:R.183, A:M.396, A:P.397, A:R.399 ACE-GLN-ALC-ASP-LEU-PHE.2: 11 residues within 4Å: Chain B: L.164, T.181, R.183, F.184, P.259, L.264, L.394, M.396, P.397, V.398, R.399 12 PLIP interactions: 12 interactions with chain B Hydrophobic interactions: B:L.164, B:T.181, B:R.183, B:F.184, B:P.259, B:L.264, B:L.394 Hydrogen bonds: B:R.183, B:M.396, B:P.397, B:R.399 Salt bridges: B:R.183

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Andre, C. et al., Peptide Interactions on Bacterial Sliding Clamps. Acs Infect Dis. (2019)

Release Date

2019-04-10

Peptides

Beta sliding clamp: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

Beta sliding clamp

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