SMTL ID : 6g2g.1

Fe-S assembly Cfd1

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.57 Å

Oligo State

homo-dimer

Ligands

1 x SF4: IRON/SULFUR CLUSTER(Non-covalent)

SF4.1: 8 residues within 4Å: Chain A: C.199, N.201, C.202, E.204 Chain B: C.199, N.201, C.202, E.204 4 PLIP interactions: 2 interactions with chain B, 2 interactions with chain A, Metal complexes: B:C.199, B:C.202, A:C.199, A:C.202

5 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 7 residues within 4Å: Chain A: G.17, G.18, V.19, G.20, K.21, S.22, P.49 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:G.18, A:V.19, A:G.20, A:K.21, A:S.22, A:S.22 Salt bridges: A:K.21 SO4.3: 2 residues within 4Å: Chain A: R.186, R.224 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:R.186, A:R.224 SO4.4: 7 residues within 4Å: Chain B: G.17, G.18, V.19, G.20, K.21, S.22, P.49 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:G.18, B:V.19, B:G.20, B:K.21, B:S.22 SO4.5: 4 residues within 4Å: Chain B: V.57, V.62, S.90, F.93 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:S.90, B:S.90, B:F.93 SO4.6: 3 residues within 4Å: Chain B: R.186, V.187, R.224 2 PLIP interactions: 2 interactions with chain B Salt bridges: B:R.186, B:R.224

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Stehling, O. et al., Function and crystal structure of the dimeric P-loop ATPase CFD1 coordinating an exposed [4Fe-4S] cluster for transfer to apoproteins. Proc. Natl. Acad. Sci. U.S.A. (2018)

Release Date

2019-01-23

Peptides

Cytosolic Fe-S cluster assembly factor CFD1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Cytosolic Fe-S cluster assembly factor CFD1