SMTL ID : 6g2o.1

X-ray structure of NSD3-PWWP1 in complex with compound BI-9321

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.81 Å

Oligo State

monomer

Ligands

1 x EJE: [4-[5-(7-fluoranylquinolin-4-yl)-1-methyl-imidazol-4-yl]-3,5-dimethyl-phenyl]methanamine(Non-covalent)

EJE.1: 10 residues within 4Å: Chain A: V.16, Y.19, W.22, F.50, S.52, Q.54, E.56, R.57, E.102, Q.105 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:Y.19, A:Y.19, A:W.22, A:W.22, A:F.50, A:F.50, A:Q.54, A:E.56, A:E.56, A:Q.105 Hydrogen bonds: A:S.52 Water bridges: A:Q.54, A:E.56, A:E.56

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bottcher, J. et al., Fragment-based discovery of a chemical probe for the PWWP1 domain of NSD3. Nat.Chem.Biol. (2019)

Release Date

2019-06-26

Peptides

Histone-lysine N-methyltransferase NSD3: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Histone-lysine N-methyltransferase NSD3

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