SMTL ID : 6g3u.1 (1 other biounit)

Structure of Pseudomonas aeruginosa Isocitrate Dehydrogenase, IDH

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.71 Å

Oligo State

monomer

Ligands

1 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NAP.1: 22 residues within 4Å: Chain A: K.79, P.81, N.82, I.83, S.84, N.132, R.136, I.344, A.347, T.557, A.559, G.579, G.580, S.581, A.582, P.583, H.585, R.596, W.597, D.598, R.645 Ligands: AKG.2 18 PLIP interactions: 18 interactions with chain A Hydrogen bonds: A:K.79, A:K.79, A:N.82, A:S.84, A:S.84, A:N.132, A:R.136, A:T.557, A:G.580, A:S.581, A:A.582, A:D.598, A:D.598 Water bridges: A:N.82 Salt bridges: A:H.585, A:R.596, A:R.645 pi-Stacking: A:H.585

1 x AKG: 2-OXOGLUTARIC ACID(Non-covalent)

AKG.2: 10 residues within 4Å: Chain A: S.84, S.129, N.132, R.136, R.142, K.251, Y.416, R.543, D.544 Ligands: NAP.1 12 PLIP interactions: 12 interactions with chain A Hydrogen bonds: A:S.84, A:S.129, A:N.132, A:K.251, A:Y.416 Water bridges: A:R.142, A:T.547 Salt bridges: A:R.136, A:R.142, A:K.251, A:K.251, A:R.543

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Crousilles, A. et al., Gluconeogenic precursor availability regulates flux through the glyoxylate shunt inPseudomonas aeruginosa. J. Biol. Chem. (2018)

Release Date

2018-08-01

Peptides

Isocitrate dehydrogenase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Isocitrate dehydrogenase

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