SMTL ID : 6g3w.1 (1 other biounit)

Crystal structure of the BIR3 - SERK2 complex from Arabidopsis thaliana.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

hetero-1-1-mer

Ligands

2 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA.1: 5 residues within 4Å: Chain A: L.102, N.126, N.150, N.173 Chain B: E.47 No protein-ligand interaction detected (PLIP) NAG-NAG-BMA.2: 5 residues within 4Å: Chain A: M.135, T.138, N.139, N.160, G.161 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:M.135

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.3: 4 residues within 4Å: Chain A: P.63, Q.67, D.88, N.91 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:D.88 Hydrogen bonds: A:D.88, A:N.91 NAG.5: 4 residues within 4Å: Chain B: P.27, N.28, S.32, S.33 3 PLIP interactions: 3 interactions with chain B Hydrophobic interactions: B:P.27 Hydrogen bonds: B:N.28, B:S.33

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.4: 3 residues within 4Å: Chain A: T.40, R.49, D.51 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:T.40

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.6: 4 residues within 4Å: Chain B: S.90, Q.91, S.94, Q.116 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hohmann, U. et al., The SERK3 elongated allele defines a role for BIR ectodomains in brassinosteroid signalling. Nat Plants (2018)

Release Date

2018-04-04

Peptides

Somatic embryogenesis receptor kinase 2: A
Probable inactive receptor kinase At1g27190: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Somatic embryogenesis receptor kinase 2

Probable inactive receptor kinase At1g27190

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